Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   ACF1HB_RS07340 Genome accession   NZ_CP180118
Coordinates   1591433..1592059 (+) Length   208 a.a.
NCBI ID   WP_021240856.1    Uniprot ID   A0AB35EUS1
Organism   Enterobacter roggenkampii isolate 2024CK-01530     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1586433..1597059
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACF1HB_RS07320 (ACF1HB_07320) - 1586830..1588590 (-) 1761 WP_087855301.1 AAA family ATPase -
  ACF1HB_RS07325 (ACF1HB_07325) matP 1588777..1589229 (+) 453 WP_008499929.1 macrodomain Ter protein MatP -
  ACF1HB_RS07330 (ACF1HB_07330) ompA 1589296..1590351 (-) 1056 WP_008499928.1 porin OmpA -
  ACF1HB_RS07335 (ACF1HB_07335) sulA 1590706..1591215 (-) 510 WP_021240857.1 SOS-induced cell division inhibitor SulA -
  ACF1HB_RS07340 (ACF1HB_07340) sxy/tfoX 1591433..1592059 (+) 627 WP_021240856.1 TfoX/Sxy family DNA transformation protein Regulator
  ACF1HB_RS07345 (ACF1HB_07345) yccS 1592016..1594178 (-) 2163 WP_222664837.1 YccS family putative transporter -
  ACF1HB_RS07350 (ACF1HB_07350) - 1594198..1594644 (-) 447 WP_008499924.1 YccF domain-containing protein -
  ACF1HB_RS07355 (ACF1HB_07355) helD 1594768..1596822 (+) 2055 WP_222664838.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23914.49 Da        Isoelectric Point: 9.6030

>NTDB_id=1094145 ACF1HB_RS07340 WP_021240856.1 1591433..1592059(+) (sxy/tfoX) [Enterobacter roggenkampii isolate 2024CK-01530]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESAKYCVKNASSFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALSAARKERYQRHQRNRLKDLPNLTFQLEVLLYEAGITNEETLRALGARASWLKMRAKN
KALSIKVLFALEGAIEGLHEAALPAGIRRELTEWFNALPEPQESRSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=1094145 ACF1HB_RS07340 WP_021240856.1 1591433..1592059(+) (sxy/tfoX) [Enterobacter roggenkampii isolate 2024CK-01530]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTCTCTCCGTTGGGCGAGATTCATCATCGCGCGCT
GTTTGGCGGTTACACCCTGGCGGTCGATGATGCGGTCTTTGCCATGGTGTCCGATGGCGAACTTTACCTTCGCGCGTGTG
AAGAGAGTGCAAAATACTGTGTAAAAAATGCTTCCTCCTTCTTGACGTTAATGAAGCGAGGCCGCCCGGTGCTGCTCAAC
TATTATCGTGTGGATGACGGATTATGGCAGGACAGGGAGCGGTTGCTTCAGCTCTCCTCGTTTGCACTCAGTGCGGCAAG
GAAAGAGCGCTACCAGCGTCATCAACGAAACCGTCTTAAGGATCTGCCGAACCTGACCTTTCAGCTTGAAGTCTTGCTCT
ATGAAGCCGGTATCACCAATGAAGAAACGCTGCGGGCGCTGGGCGCCAGAGCGAGCTGGCTGAAGATGCGGGCAAAGAAT
AAAGCACTCAGTATAAAAGTGCTCTTTGCGCTGGAAGGGGCAATCGAAGGGCTGCATGAGGCGGCACTCCCGGCAGGTAT
CCGCCGGGAGCTGACGGAGTGGTTTAATGCGCTGCCTGAGCCGCAGGAGAGTCGTTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.128

97.596

0.567

Multiple sequence alignment