Detailed information NTG1094052

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: ACINK0_RS04155
• Genome accession: NZ_CP179945
• Coordinates: 784114..785199 (+)
• Length: 361 a.a.
• NCBI ID: WP_414657391.1
• Uniprot ID: -
• Organism: Deinococcus sp. VB343
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 779114..790199

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACINK0_RS04125 (ACINK0_04125)	-	779672..780184 (+)	513	WP_414657385.1	N-acetyltransferase family protein	-
ACINK0_RS04130 (ACINK0_04130)	-	780230..780646 (-)	417	WP_414657386.1	CBS domain-containing protein	-
ACINK0_RS04135 (ACINK0_04135)	-	780736..781026 (+)	291	WP_414657387.1	hypothetical protein	-
ACINK0_RS04140 (ACINK0_04140)	-	781043..781621 (+)	579	WP_414657388.1	phosphoribosylanthranilate isomerase	-
ACINK0_RS04145 (ACINK0_04145)	-	781820..782686 (-)	867	WP_414657389.1	metalloenzyme domain protein	-
ACINK0_RS04150 (ACINK0_04150)	-	782836..784014 (+)	1179	WP_414657390.1	tetratricopeptide repeat protein	-
ACINK0_RS04155 (ACINK0_04155)	dprA	784114..785199 (+)	1086	WP_414657391.1	DNA-processing protein DprA	Machinery gene
ACINK0_RS04160 (ACINK0_04160)	efp	785305..785862 (+)	558	WP_303101545.1	elongation factor P	-
ACINK0_RS04165 (ACINK0_04165)	accB	786044..786604 (+)	561	WP_339094632.1	acetyl-CoA carboxylase biotin carboxyl carrier protein	-
ACINK0_RS04170 (ACINK0_04170)	accC	786688..788025 (+)	1338	WP_414657392.1	acetyl-CoA carboxylase biotin carboxylase subunit	-
ACINK0_RS04175 (ACINK0_04175)	-	788105..789202 (-)	1098	WP_339094181.1	IS1 transposase	-

Sequence

Protein

• Length: 361 a.a.
• Molecular weight: 37037.37 Da
• Isoelectric Point: 6.5012

>NTDB_id=1094052 ACINK0_RS04155 WP_414657391.1 784114..785199(+) (dprA) [Deinococcus sp. VB343]
MTPDPASELLALLTLKFTPGLGPRRIEALRRHFGTAQAALRANLAQLRQVEGLDARSVASIGQAAAAQKAEAELTQAAQK
GVTLLGRGLPEYPAALDALGDPPPVLWVWGEGGAALLSGLDTVPRSIGIVGTRAASPHALALTRTIAGELAGAGVLVVSG
LARGVDTAAHLAALEAGGPTVGVLGSAVDVIYPRENHHLAGRMTLLSEYPLGTGPAQHHFPSRNRLIAALSAGVLVVEGE
RKSGSLITATHALDCGRSVFAVPGRAGDPRASGPHALIRDGAVLTETAQDILTELGWGETAPAAPLDLPPEQARVLAALQ
TPATLDDLHAATGLSVPDLQTALVMLQLSGLVYEVGGRWSR

Nucleotide

• Length: 1086 bp

>NTDB_id=1094052 ACINK0_RS04155 WP_414657391.1 784114..785199(+) (dprA) [Deinococcus sp. VB343]
GTGACCCCCGACCCCGCCTCCGAACTGCTGGCCCTGCTAACGCTCAAATTCACGCCGGGGCTGGGGCCGAGGCGAATCGA
GGCGCTGCGGCGTCATTTCGGAACAGCACAGGCGGCGCTGCGGGCGAATCTGGCCCAGTTGCGGCAGGTCGAAGGGCTGG
ATGCCCGCTCGGTGGCCTCCATCGGGCAAGCTGCGGCGGCGCAGAAAGCCGAGGCCGAACTGACGCAGGCCGCGCAAAAA
GGTGTGACCCTGCTGGGCCGTGGCTTGCCCGAATATCCGGCGGCCCTGGACGCGTTGGGCGACCCGCCCCCGGTGCTGTG
GGTCTGGGGCGAGGGCGGGGCGGCGCTGCTGAGCGGGCTGGACACCGTGCCGCGTTCTATCGGCATCGTCGGTACGCGGG
CGGCGAGTCCTCATGCGCTCGCGCTGACCCGCACCATCGCGGGCGAACTGGCGGGCGCGGGGGTGCTGGTCGTCAGCGGC
TTGGCGCGGGGGGTAGACACGGCGGCCCACCTCGCGGCGCTGGAGGCGGGCGGCCCGACGGTGGGCGTGCTGGGCAGCGC
GGTAGACGTGATTTACCCGCGTGAAAACCACCACCTCGCCGGGCGCATGACCCTGCTCAGCGAGTATCCGCTCGGGACTG
GCCCGGCGCAGCACCATTTTCCCAGCCGCAATCGCCTCATCGCCGCGCTGTCGGCGGGGGTGCTGGTGGTGGAAGGTGAG
CGCAAATCCGGTTCACTGATTACAGCGACCCACGCCCTCGACTGCGGGCGCAGCGTGTTCGCCGTGCCGGGAAGGGCAGG
CGACCCCCGTGCCAGTGGCCCGCACGCCCTGATCCGGGACGGGGCCGTGCTGACCGAAACCGCGCAGGACATCCTCACCG
AACTCGGCTGGGGCGAGACCGCACCCGCCGCGCCCCTCGACCTGCCGCCCGAACAGGCGCGGGTGCTGGCGGCGCTGCAA
ACCCCCGCCACCCTGGACGACCTGCACGCGGCGACGGGCCTGAGCGTGCCGGACTTGCAGACCGCGCTGGTTATGCTGCA
ACTGTCCGGGCTGGTCTACGAAGTGGGCGGACGCTGGAGCCGCTAG

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (300-357)

• DNA recombination-mediator protein A (DNA_processg_A) (78-285)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	82.386	97.507	0.803
dprA	Vibrio campbellii strain DS40M4	37.533	100	0.396
dprA	Glaesserella parasuis strain SC1401	34.026	100	0.363