Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACMGRF_RS13365 Genome accession   NZ_CP179923
Coordinates   2906963..2907364 (-) Length   133 a.a.
NCBI ID   WP_005418455.1    Uniprot ID   -
Organism   Stenotrophomonas sp. EMP41     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2901963..2912364
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACMGRF_RS13350 (ACMGRF_13350) - 2903974..2906010 (-) 2037 WP_049415562.1 methyl-accepting chemotaxis protein -
  ACMGRF_RS13355 (ACMGRF_13355) - 2906052..2906582 (-) 531 WP_049415560.1 chemotaxis protein CheW -
  ACMGRF_RS13360 (ACMGRF_13360) - 2906582..2906944 (-) 363 WP_005410717.1 response regulator -
  ACMGRF_RS13365 (ACMGRF_13365) pilG 2906963..2907364 (-) 402 WP_005418455.1 twitching motility response regulator PilG Regulator
  ACMGRF_RS13370 (ACMGRF_13370) gshB 2907605..2908552 (+) 948 WP_134709577.1 glutathione synthase -
  ACMGRF_RS13375 (ACMGRF_13375) - 2908552..2909436 (+) 885 WP_414485275.1 energy transducer TonB -
  ACMGRF_RS13380 (ACMGRF_13380) tsaB 2909811..2910524 (-) 714 WP_049411606.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14657.98 Da        Isoelectric Point: 6.3483

>NTDB_id=1093862 ACMGRF_RS13365 WP_005418455.1 2906963..2907364(-) (pilG) [Stenotrophomonas sp. EMP41]
MTENTTAGGELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKATPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=1093862 ACMGRF_RS13365 WP_005418455.1 2906963..2907364(-) (pilG) [Stenotrophomonas sp. EMP41]
ATGACTGAAAACACGACTGCGGGCGGGGAACTCGCAGGACTCCGGGTGATGGTCATCGATGATTCGAAGACCATCCGCAG
GACTGCGGAAACGCTGCTCAAGCGCGAAGGCTGCGAGGTGGTCACCGCCACCGACGGCTTCGAAGCGCTTGCCAAGATCG
CAGACCAGCAACCGCAGATCATCTTCGTCGACATCATGATGCCGCGCCTGGACGGGTACCAGACCTGCGCGCTGATCAAG
GGCAACCAGCTGTTCAAGGCGACCCCGGTCATCATGCTGTCGTCCAAGGATGGCCTGTTCGACAAGGCGCGGGGACGCAT
CGTCGGCTCGGAGCAGTACCTGACGAAGCCTTTTACGCGTGAAGAACTGCTGGGTGCCATCCGCACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.38

90.977

0.677

Multiple sequence alignment