Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | HW06_RS02180 | Genome accession | NZ_CP008860 |
| Coordinates | 460551..460916 (+) | Length | 121 a.a. |
| NCBI ID | WP_003084587.1 | Uniprot ID | A0A0H2ZKW2 |
| Organism | Pseudomonas aeruginosa strain H27930 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 455551..465916
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HW06_RS02150 (HW06_07655) | pyrR | 456173..456685 (-) | 513 | WP_003100948.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
| HW06_RS02155 (HW06_07660) | ruvX | 456797..457231 (-) | 435 | WP_003084575.1 | Holliday junction resolvase RuvX | - |
| HW06_RS02160 (HW06_07665) | - | 457231..457800 (-) | 570 | WP_003100947.1 | YqgE/AlgH family protein | - |
| HW06_RS02165 (HW06_07670) | - | 457849..458742 (-) | 894 | WP_003084580.1 | TonB family protein | - |
| HW06_RS02170 (HW06_07675) | gshB | 458889..459842 (-) | 954 | WP_003100943.1 | glutathione synthase | - |
| HW06_RS02175 (HW06_07680) | pilG | 460097..460504 (+) | 408 | WP_003084583.1 | twitching motility response regulator PilG | Regulator |
| HW06_RS02180 (HW06_07685) | pilH | 460551..460916 (+) | 366 | WP_003084587.1 | twitching motility response regulator PilH | Machinery gene |
| HW06_RS02185 (HW06_07690) | - | 460967..461503 (+) | 537 | WP_003084590.1 | chemotaxis protein CheW | - |
| HW06_RS02190 (HW06_07695) | pilJ | 461588..463636 (+) | 2049 | WP_003100940.1 | chemotaxis chemoreceptor PilJ | - |
| HW06_RS02195 (HW06_07700) | pilK | 463697..464572 (+) | 876 | WP_003100938.1 | type 4 fimbrial methyltransferase PilK | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13273.30 Da Isoelectric Point: 5.1961
>NTDB_id=109385 HW06_RS02180 WP_003084587.1 460551..460916(+) (pilH) [Pseudomonas aeruginosa strain H27930]
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
Nucleotide
Download Length: 366 bp
>NTDB_id=109385 HW06_RS02180 WP_003084587.1 460551..460916(+) (pilH) [Pseudomonas aeruginosa strain H27930]
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.975 |
98.347 |
0.364 |