Detailed information    

insolico Bioinformatically predicted

Overview


Name   sxy/tfoX   Type   Regulator
Locus tag   ACMGG3_RS03650 Genome accession   NZ_CP179899
Coordinates   774062..774688 (+) Length   208 a.a.
NCBI ID   WP_020884792.1    Uniprot ID   A0A839BJN6
Organism   Enterobacter sp. BNK-18     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context


Location: 769062..779688
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACMGG3_RS03630 (ACMGG3_03630) - 769456..771216 (-) 1761 WP_025204537.1 AAA family ATPase -
  ACMGG3_RS03635 (ACMGG3_03635) matP 771403..771855 (+) 453 WP_014169429.1 macrodomain Ter protein MatP -
  ACMGG3_RS03640 (ACMGG3_03640) ompA 771925..772980 (-) 1056 WP_020884794.1 porin OmpA -
  ACMGG3_RS03645 (ACMGG3_03645) sulA 773335..773844 (-) 510 WP_078774793.1 SOS-induced cell division inhibitor SulA -
  ACMGG3_RS03650 (ACMGG3_03650) sxy/tfoX 774062..774688 (+) 627 WP_020884792.1 TfoX/Sxy family DNA transformation protein Regulator
  ACMGG3_RS03655 (ACMGG3_03655) yccS 774645..776807 (-) 2163 WP_020884791.1 YccS family putative transporter -
  ACMGG3_RS03660 (ACMGG3_03660) - 776827..777273 (-) 447 WP_025204535.1 YccF domain-containing protein -
  ACMGG3_RS03665 (ACMGG3_03665) helD 777397..779451 (+) 2055 WP_047955312.1 DNA helicase IV -

Sequence


Protein


Download         Length: 208 a.a.        Molecular weight: 23864.38 Da        Isoelectric Point: 9.2489

>NTDB_id=1093561 ACMGG3_RS03650 WP_020884792.1 774062..774688(+) (sxy/tfoX) [Enterobacter sp. BNK-18]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESAKYCVKNASSFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALNAARKERSQRDRRNRLKDLPNLTFQLEVLLFEAGITDEETLRELGARASWLKMRAKN
KALSIKVLFALEGAIAGLHEAALPAGIRRELTEWFNALPEPQENHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=1093561 ACMGG3_RS03650 WP_020884792.1 774062..774688(+) (sxy/tfoX) [Enterobacter sp. BNK-18]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTTTCACCCTTAGGTGAAATCCACCATCGTGCGCT
GTTTGGGGGGTATACCCTGGCCGTAGATGATGCCGTCTTCGCTATGGTCTCCGACGGGGAACTGTATCTCCGGGCCTGTG
AGGAAAGTGCAAAATACTGTGTAAAAAATGCCTCGTCATTCTTAACCCTCATGAAACGGGGTCGTCCGGTGCTGCTCAAT
TATTATCGTGTCGATGACGGACTGTGGCAGGACAGAGAACGGCTGCTTCAGCTCTCCTCGTTCGCGCTCAATGCGGCACG
AAAAGAGCGTTCGCAGCGTGATCGGCGAAACCGCCTCAAGGACTTGCCCAATCTCACCTTTCAGCTTGAAGTGCTGCTCT
TTGAAGCCGGAATCACTGATGAAGAGACGCTGCGGGAGCTGGGTGCCCGTGCGAGCTGGCTAAAGATGCGGGCGAAAAAT
AAAGCGCTCAGCATTAAAGTGCTCTTCGCACTGGAAGGGGCCATCGCCGGACTTCATGAGGCGGCACTCCCGGCGGGAAT
TCGCCGGGAGTTAACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGGAGAATCACTCCTCCAGGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A839BJN6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

59.113

97.596

0.577


Multiple sequence alignment