Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACMGF5_RS11160 Genome accession   NZ_CP179898
Coordinates   2438921..2439322 (+) Length   133 a.a.
NCBI ID   WP_039602038.1    Uniprot ID   A0A3R8VCC6
Organism   Pseudomonas sp. BNK-15     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2433921..2444322
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACMGF5_RS11130 (ACMGF5_11130) - 2434034..2435038 (-) 1005 WP_012312408.1 aspartate carbamoyltransferase catalytic subunit -
  ACMGF5_RS11135 (ACMGF5_11135) pyrR 2435052..2435570 (-) 519 WP_046785024.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  ACMGF5_RS11140 (ACMGF5_11140) ruvX 2435620..2436045 (-) 426 WP_012312410.1 Holliday junction resolvase RuvX -
  ACMGF5_RS11145 (ACMGF5_11145) - 2436045..2436614 (-) 570 WP_039602035.1 YqgE/AlgH family protein -
  ACMGF5_RS11150 (ACMGF5_11150) - 2436676..2437578 (-) 903 WP_414157783.1 TonB family protein -
  ACMGF5_RS11155 (ACMGF5_11155) gshB 2437725..2438678 (-) 954 WP_039602037.1 glutathione synthase -
  ACMGF5_RS11160 (ACMGF5_11160) pilG 2438921..2439322 (+) 402 WP_039602038.1 response regulator Regulator
  ACMGF5_RS11165 (ACMGF5_11165) pilH 2439370..2439735 (+) 366 WP_012312415.1 twitching motility response regulator PilH -
  ACMGF5_RS11170 (ACMGF5_11170) - 2439732..2440286 (+) 555 WP_046785027.1 chemotaxis protein CheW -
  ACMGF5_RS11175 (ACMGF5_11175) - 2440334..2442358 (+) 2025 WP_239539541.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14696.97 Da        Isoelectric Point: 6.3259

>NTDB_id=1093552 ACMGF5_RS11160 WP_039602038.1 2438921..2439322(+) (pilG) [Pseudomonas sp. BNK-15]
MEQPLKVMVIDDSRTIRRTAQMLLGEAGCEVITASDGFDALAKIVDHQPQIIFVDVLMPRLDGYQTCAVIKHNSAFKDIP
VILLSSRDGLFDKARGRVVGSDQFLTKPFSKEELLDAIRAHVPGFAAHEQHAP

Nucleotide


Download         Length: 402 bp        

>NTDB_id=1093552 ACMGF5_RS11160 WP_039602038.1 2438921..2439322(+) (pilG) [Pseudomonas sp. BNK-15]
ATGGAACAACCCCTGAAGGTGATGGTGATCGACGATTCACGCACGATCCGCCGCACTGCGCAGATGTTGCTCGGTGAAGC
AGGCTGCGAGGTGATCACCGCCAGCGACGGTTTCGATGCCCTGGCCAAGATCGTTGACCACCAGCCACAGATCATCTTCG
TCGACGTGCTCATGCCGCGCCTGGATGGCTACCAGACCTGCGCCGTGATCAAGCACAACAGCGCCTTCAAGGACATCCCG
GTCATCCTGCTGTCGTCGCGCGACGGCCTGTTCGACAAGGCGCGCGGGCGGGTGGTCGGCTCCGATCAGTTCCTGACCAA
ACCATTCAGCAAGGAAGAACTGCTCGACGCGATCAGGGCCCACGTGCCCGGGTTCGCCGCGCACGAACAACACGCACCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(7-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3R8VCC6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

70.833

90.226

0.639

Multiple sequence alignment