Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | ACK8DC_RS17495 | Genome accession | NZ_CP179883 |
| Coordinates | 3642769..3643242 (-) | Length | 157 a.a. |
| NCBI ID | WP_001214067.1 | Uniprot ID | A0A7U3Y304 |
| Organism | Acinetobacter baumannii strain MRSN15091 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3637769..3648242
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACK8DC_RS17480 (ACK8DC_17480) | pilX | 3640398..3641216 (-) | 819 | WP_000149377.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| ACK8DC_RS17485 (ACK8DC_17485) | pilW | 3641213..3642214 (-) | 1002 | WP_000079192.1 | PilW family protein | Machinery gene |
| ACK8DC_RS17490 (ACK8DC_17490) | pilV | 3642215..3642775 (-) | 561 | WP_002194578.1 | type IV pilus modification protein PilV | Machinery gene |
| ACK8DC_RS17495 (ACK8DC_17495) | fimU | 3642769..3643242 (-) | 474 | WP_001214067.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| ACK8DC_RS17500 (ACK8DC_17500) | ispH | 3643412..3644362 (-) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| ACK8DC_RS17505 (ACK8DC_17505) | gmk | 3644485..3645114 (+) | 630 | WP_000015937.1 | guanylate kinase | - |
| ACK8DC_RS17510 (ACK8DC_17510) | rpoZ | 3645187..3645465 (+) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| ACK8DC_RS17515 (ACK8DC_17515) | - | 3645504..3645634 (+) | 131 | Protein_3420 | hypothetical protein | - |
| ACK8DC_RS17520 (ACK8DC_17520) | - | 3645674..3647779 (+) | 2106 | WP_001117590.1 | RelA/SpoT family protein | - |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16823.40 Da Isoelectric Point: 8.5355
>NTDB_id=1093416 ACK8DC_RS17495 WP_001214067.1 3642769..3643242(-) (fimU) [Acinetobacter baumannii strain MRSN15091]
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDGNQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEETC
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDGNQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEETC
Nucleotide
Download Length: 474 bp
>NTDB_id=1093416 ACK8DC_RS17495 WP_001214067.1 3642769..3643242(-) (fimU) [Acinetobacter baumannii strain MRSN15091]
ATGAGGGGAATTATTCCACAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCAGTCATGGCTATTATTGCACT
GATGGCTGCGCCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGGTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
ATGAGGGGAATTATTCCACAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCAGTCATGGCTATTATTGCACT
GATGGCTGCGCCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGGTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
99.363 |
100 |
0.994 |