Detailed information NTG1093350

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ACK8DD_RS10005
• Genome accession: NZ_CP179880
• Coordinates: 2117275..2117976 (-)
• Length: 233 a.a.
• NCBI ID: WP_004747380.1
• Uniprot ID: A0A9E9PDK8
• Organism: Acinetobacter baumannii strain MRSN548254
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2112275..2122976

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACK8DD_RS09975 (ACK8DD_09975)	-	2112582..2113025 (-)	444	WP_004747375.1	SRPBCC family protein	-
ACK8DD_RS09980 (ACK8DD_09980)	tadA	2113095..2113598 (-)	504	WP_001997771.1	tRNA adenosine(34) deaminase TadA	-
ACK8DD_RS09985 (ACK8DD_09985)	-	2113605..2114729 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
ACK8DD_RS09990 (ACK8DD_09990)	ung	2114726..2115439 (-)	714	WP_001177527.1	uracil-DNA glycosylase	-
ACK8DD_RS09995 (ACK8DD_09995)	-	2115490..2116086 (-)	597	WP_000908453.1	6-pyruvoyl trahydropterin synthase family protein	-
ACK8DD_RS10000 (ACK8DD_10000)	gspK	2116316..2117275 (-)	960	WP_004747379.1	type II secretion system minor pseudopilin GspK	-
ACK8DD_RS10005 (ACK8DD_10005)	xcpW	2117275..2117976 (-)	702	WP_004747380.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ACK8DD_RS10010 (ACK8DD_10010)	xcpV	2117976..2118356 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
ACK8DD_RS10015 (ACK8DD_10015)	-	2118346..2118900 (-)	555	WP_000841371.1	type II secretion system protein	-
ACK8DD_RS10020 (ACK8DD_10020)	-	2118910..2119518 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
ACK8DD_RS10025 (ACK8DD_10025)	-	2119556..2120329 (-)	774	WP_000497302.1	TatD family hydrolase	-
ACK8DD_RS10030 (ACK8DD_10030)	-	2120347..2120688 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
ACK8DD_RS10035 (ACK8DD_10035)	-	2120700..2121680 (-)	981	WP_004747384.1	DNA polymerase III, delta' subunit	-
ACK8DD_RS10040 (ACK8DD_10040)	kdsB	2121692..2122453 (-)	762	WP_000680696.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26629.59 Da
• Isoelectric Point: 9.5501

>NTDB_id=1093350 ACK8DD_RS10005 WP_004747380.1 2117275..2117976(-) (xcpW) [Acinetobacter baumannii strain MRSN548254]
MIKNKYIHIRSFASRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=1093350 ACK8DD_RS10005 WP_004747380.1 2117275..2117976(-) (xcpW) [Acinetobacter baumannii strain MRSN548254]
ATGATAAAAAATAAATATATTCACATCCGCAGCTTTGCTTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTACATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCCAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTCTACGTTTTAGTAAAGCTGGGGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996