Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | ACK8DD_RS01595 | Genome accession | NZ_CP179880 |
| Coordinates | 342239..342712 (+) | Length | 157 a.a. |
| NCBI ID | WP_001214067.1 | Uniprot ID | A0A7U3Y304 |
| Organism | Acinetobacter baumannii strain MRSN548254 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 337239..347712
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACK8DD_RS01570 (ACK8DD_01570) | - | 337702..339807 (-) | 2106 | WP_001117590.1 | RelA/SpoT family protein | - |
| ACK8DD_RS01575 (ACK8DD_01575) | - | 339847..339977 (-) | 131 | Protein_301 | hypothetical protein | - |
| ACK8DD_RS01580 (ACK8DD_01580) | rpoZ | 340016..340294 (-) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| ACK8DD_RS01585 (ACK8DD_01585) | gmk | 340367..340996 (-) | 630 | WP_000015937.1 | guanylate kinase | - |
| ACK8DD_RS01590 (ACK8DD_01590) | ispH | 341119..342069 (+) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| ACK8DD_RS01595 (ACK8DD_01595) | fimU | 342239..342712 (+) | 474 | WP_001214067.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| ACK8DD_RS01600 (ACK8DD_01600) | pilV | 342706..343266 (+) | 561 | WP_002194578.1 | type IV pilus modification protein PilV | Machinery gene |
| ACK8DD_RS01605 (ACK8DD_01605) | pilW | 343267..344268 (+) | 1002 | WP_000079192.1 | PilW family protein | Machinery gene |
| ACK8DD_RS01610 (ACK8DD_01610) | pilX | 344265..345083 (+) | 819 | WP_000149377.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16823.40 Da Isoelectric Point: 8.5355
>NTDB_id=1093335 ACK8DD_RS01595 WP_001214067.1 342239..342712(+) (fimU) [Acinetobacter baumannii strain MRSN548254]
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDGNQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEETC
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDGNQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEETC
Nucleotide
Download Length: 474 bp
>NTDB_id=1093335 ACK8DD_RS01595 WP_001214067.1 342239..342712(+) (fimU) [Acinetobacter baumannii strain MRSN548254]
ATGAGGGGAATTATTCCACAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCAGTCATGGCTATTATTGCACT
GATGGCTGCGCCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGGTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
ATGAGGGGAATTATTCCACAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCAGTCATGGCTATTATTGCACT
GATGGCTGCGCCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGGTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
99.363 |
100 |
0.994 |