Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ACK8DB_RS10025 | Genome accession | NZ_CP179875 |
| Coordinates | 2119165..2119545 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain MRSN548102 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2114165..2124545
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACK8DB_RS09995 (ACK8DB_09995) | tadA | 2114284..2114787 (-) | 504 | WP_001997771.1 | tRNA adenosine(34) deaminase TadA | - |
| ACK8DB_RS10000 (ACK8DB_10000) | - | 2114794..2115918 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ACK8DB_RS10005 (ACK8DB_10005) | ung | 2115915..2116628 (-) | 714 | WP_001177527.1 | uracil-DNA glycosylase | - |
| ACK8DB_RS10010 (ACK8DB_10010) | - | 2116679..2117275 (-) | 597 | WP_000908453.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| ACK8DB_RS10015 (ACK8DB_10015) | gspK | 2117505..2118464 (-) | 960 | WP_004747379.1 | type II secretion system minor pseudopilin GspK | - |
| ACK8DB_RS10020 (ACK8DB_10020) | xcpW | 2118464..2119165 (-) | 702 | WP_004747380.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ACK8DB_RS10025 (ACK8DB_10025) | xcpV | 2119165..2119545 (-) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ACK8DB_RS10030 (ACK8DB_10030) | - | 2119535..2120089 (-) | 555 | WP_000841371.1 | type II secretion system protein | - |
| ACK8DB_RS10035 (ACK8DB_10035) | - | 2120099..2120707 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| ACK8DB_RS10040 (ACK8DB_10040) | - | 2120745..2121518 (-) | 774 | WP_000497302.1 | TatD family hydrolase | - |
| ACK8DB_RS10045 (ACK8DB_10045) | - | 2121536..2121877 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| ACK8DB_RS10050 (ACK8DB_10050) | - | 2121889..2122869 (-) | 981 | WP_004747384.1 | DNA polymerase III, delta' subunit | - |
| ACK8DB_RS10055 (ACK8DB_10055) | kdsB | 2122881..2123642 (-) | 762 | WP_000680696.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=1093304 ACK8DB_RS10025 WP_000836911.1 2119165..2119545(-) (xcpV) [Acinetobacter baumannii strain MRSN548102]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=1093304 ACK8DB_RS10025 WP_000836911.1 2119165..2119545(-) (xcpV) [Acinetobacter baumannii strain MRSN548102]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTTGCAGCTGTCGCTTTAACTAA
AGTTGCAATGCAGTACACTCAGTCTACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTTGCAGCTGTCGCTTTAACTAA
AGTTGCAATGCAGTACACTCAGTCTACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |