Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | ACK8DE_RS17830 | Genome accession | NZ_CP179872 |
| Coordinates | 3688511..3689038 (-) | Length | 175 a.a. |
| NCBI ID | WP_024436689.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain MRSN15116 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3683511..3694038
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACK8DE_RS17810 (ACK8DE_17810) | - | 3683700..3684575 (-) | 876 | WP_000218799.1 | hypothetical protein | - |
| ACK8DE_RS17815 (ACK8DE_17815) | aroB | 3684591..3685673 (-) | 1083 | WP_001193999.1 | 3-dehydroquinate synthase | - |
| ACK8DE_RS17820 (ACK8DE_17820) | aroK | 3685702..3686271 (-) | 570 | WP_000643712.1 | shikimate kinase AroK | - |
| ACK8DE_RS17825 (ACK8DE_17825) | pilQ | 3686283..3688448 (-) | 2166 | WP_001017033.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| ACK8DE_RS17830 (ACK8DE_17830) | pilP | 3688511..3689038 (-) | 528 | WP_024436689.1 | pilus assembly protein PilP | Machinery gene |
| ACK8DE_RS17835 (ACK8DE_17835) | pilO | 3689049..3689789 (-) | 741 | WP_000076101.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| ACK8DE_RS17840 (ACK8DE_17840) | pilN | 3689786..3690427 (-) | 642 | WP_000201226.1 | PilN domain-containing protein | Machinery gene |
| ACK8DE_RS17845 (ACK8DE_17845) | pilM | 3690427..3691485 (-) | 1059 | WP_002014066.1 | pilus assembly protein PilM | Machinery gene |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 19433.66 Da Isoelectric Point: 8.9898
>NTDB_id=1093276 ACK8DE_RS17830 WP_024436689.1 3688511..3689038(-) (pilP) [Acinetobacter baumannii strain MRSN15116]
MKIKQITLYVLACAVLIGCDSRIDAVNQEMANIRNQPPLPIEPAPIFTPVPQFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALEALNMKGSMRNNRGQILALIQTPDQQIERVQVGNYMGMNQGRITHISPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP
MKIKQITLYVLACAVLIGCDSRIDAVNQEMANIRNQPPLPIEPAPIFTPVPQFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALEALNMKGSMRNNRGQILALIQTPDQQIERVQVGNYMGMNQGRITHISPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP
Nucleotide
Download Length: 528 bp
>NTDB_id=1093276 ACK8DE_RS17830 WP_024436689.1 3688511..3689038(-) (pilP) [Acinetobacter baumannii strain MRSN15116]
ATGAAAATTAAGCAAATTACTCTTTATGTTTTGGCGTGTGCTGTGCTTATCGGTTGTGATTCAAGAATTGATGCAGTAAA
TCAGGAAATGGCCAATATTCGTAATCAGCCGCCACTCCCTATTGAACCAGCACCGATTTTTACTCCTGTACCGCAATTTA
ATTACGCTGCTCATCAATTAAAAAGCCCATTTATGCCAAGTTCTCTAGCTGCCGAGCTCAAGATTATGGCGGGGAAACGG
GTTTATCCGAATTTCTCACGTGCGCCGCAACCACTCGAAAGTTATGCTCTTGAAGCTTTAAATATGAAAGGGAGCATGCG
AAATAATCGAGGGCAGATATTGGCCTTGATCCAGACACCGGATCAGCAGATTGAACGGGTACAAGTGGGTAACTATATGG
GTATGAATCAGGGCCGTATTACCCATATTAGTCCAACCCAGATTGATCTGGTTGAAATCGTACCTGATGGTCGAGAAGGC
TATGTCGAAAGACCAAGAACCTTGGTCTTGATTGGGCCTGCACCCTAA
ATGAAAATTAAGCAAATTACTCTTTATGTTTTGGCGTGTGCTGTGCTTATCGGTTGTGATTCAAGAATTGATGCAGTAAA
TCAGGAAATGGCCAATATTCGTAATCAGCCGCCACTCCCTATTGAACCAGCACCGATTTTTACTCCTGTACCGCAATTTA
ATTACGCTGCTCATCAATTAAAAAGCCCATTTATGCCAAGTTCTCTAGCTGCCGAGCTCAAGATTATGGCGGGGAAACGG
GTTTATCCGAATTTCTCACGTGCGCCGCAACCACTCGAAAGTTATGCTCTTGAAGCTTTAAATATGAAAGGGAGCATGCG
AAATAATCGAGGGCAGATATTGGCCTTGATCCAGACACCGGATCAGCAGATTGAACGGGTACAAGTGGGTAACTATATGG
GTATGAATCAGGGCCGTATTACCCATATTAGTCCAACCCAGATTGATCTGGTTGAAATCGTACCTGATGGTCGAGAAGGC
TATGTCGAAAGACCAAGAACCTTGGTCTTGATTGGGCCTGCACCCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Acinetobacter baumannii D1279779 |
99.429 |
100 |
0.994 |
| comL | Acinetobacter baylyi ADP1 |
71.839 |
99.429 |
0.714 |