Detailed information NTG1093258

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ACK8DE_RS09020
• Genome accession: NZ_CP179872
• Coordinates: 1873632..1874333 (+)
• Length: 233 a.a.
• NCBI ID: WP_004747380.1
• Uniprot ID: A0A9E9PDK8
• Organism: Acinetobacter baumannii strain MRSN15116
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1868632..1879333

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACK8DE_RS08985 (ACK8DE_08985)	kdsB	1869155..1869916 (+)	762	WP_000680696.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
ACK8DE_RS08990 (ACK8DE_08990)	-	1869928..1870908 (+)	981	WP_004747384.1	DNA polymerase III, delta' subunit	-
ACK8DE_RS08995 (ACK8DE_08995)	-	1870920..1871261 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
ACK8DE_RS09000 (ACK8DE_09000)	-	1871279..1872052 (+)	774	WP_000497302.1	TatD family hydrolase	-
ACK8DE_RS09005 (ACK8DE_09005)	-	1872090..1872698 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
ACK8DE_RS09010 (ACK8DE_09010)	-	1872708..1873262 (+)	555	WP_000841371.1	type II secretion system protein	-
ACK8DE_RS09015 (ACK8DE_09015)	xcpV	1873252..1873632 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
ACK8DE_RS09020 (ACK8DE_09020)	xcpW	1873632..1874333 (+)	702	WP_004747380.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ACK8DE_RS09025 (ACK8DE_09025)	gspK	1874333..1875292 (+)	960	WP_004747379.1	type II secretion system minor pseudopilin GspK	-
ACK8DE_RS09030 (ACK8DE_09030)	-	1875522..1876118 (+)	597	WP_000908453.1	6-pyruvoyl trahydropterin synthase family protein	-
ACK8DE_RS09035 (ACK8DE_09035)	ung	1876169..1876882 (+)	714	WP_001177527.1	uracil-DNA glycosylase	-
ACK8DE_RS09040 (ACK8DE_09040)	-	1876879..1878003 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
ACK8DE_RS09045 (ACK8DE_09045)	tadA	1878010..1878513 (+)	504	WP_001997771.1	tRNA adenosine(34) deaminase TadA	-
ACK8DE_RS09050 (ACK8DE_09050)	-	1878583..1879026 (+)	444	WP_004747375.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26629.59 Da
• Isoelectric Point: 9.5501

>NTDB_id=1093258 ACK8DE_RS09020 WP_004747380.1 1873632..1874333(+) (xcpW) [Acinetobacter baumannii strain MRSN15116]
MIKNKYIHIRSFASRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=1093258 ACK8DE_RS09020 WP_004747380.1 1873632..1874333(+) (xcpW) [Acinetobacter baumannii strain MRSN15116]
ATGATAAAAAATAAATATATTCACATCCGCAGCTTTGCTTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTACATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCCAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTCTACGTTTTAGTAAAGCTGGGGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996