Detailed information    

insolico Bioinformatically predicted

Overview


Name   ceuB   Type   Machinery gene
Locus tag   ACMGE7_RS10985 Genome accession   NZ_CP179731
Coordinates   2136957..2137910 (-) Length   317 a.a.
NCBI ID   WP_414047311.1    Uniprot ID   -
Organism   Macrococcus sp. 18KM245     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 2131957..2142910
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACMGE7_RS10960 (ACMGE7_10960) hemQ 2132424..2133173 (+) 750 WP_414045532.1 hydrogen peroxide-dependent heme synthase -
  ACMGE7_RS10965 (ACMGE7_10965) - 2133338..2133868 (-) 531 WP_414047307.1 hypothetical protein -
  ACMGE7_RS10970 (ACMGE7_10970) - 2134079..2135116 (-) 1038 WP_414047308.1 ferrated catecholamine ABC transporter substrate-binding lipoprotein SstD -
  ACMGE7_RS10975 (ACMGE7_10975) - 2135212..2136018 (-) 807 WP_414047309.1 ABC transporter ATP-binding protein -
  ACMGE7_RS10980 (ACMGE7_10980) - 2136011..2136964 (-) 954 WP_414047310.1 iron chelate uptake ABC transporter family permease subunit -
  ACMGE7_RS10985 (ACMGE7_10985) ceuB 2136957..2137910 (-) 954 WP_414047311.1 ABC transporter permease Machinery gene
  ACMGE7_RS10990 (ACMGE7_10990) - 2138109..2139455 (+) 1347 WP_414045527.1 APC family permease -
  ACMGE7_RS10995 (ACMGE7_10995) - 2139522..2139644 (+) 123 WP_414045526.1 hypothetical protein -
  ACMGE7_RS11000 (ACMGE7_11000) - 2139765..2141117 (-) 1353 WP_414047312.1 IS1182 family transposase -
  ACMGE7_RS11005 (ACMGE7_11005) - 2141241..2141603 (-) 363 WP_414047313.1 DUF423 domain-containing protein -
  ACMGE7_RS11010 (ACMGE7_11010) - 2141622..2141930 (-) 309 WP_414047314.1 DUF5327 family protein -
  ACMGE7_RS11015 (ACMGE7_11015) - 2141933..2142586 (-) 654 WP_414047315.1 uracil-DNA glycosylase -

Sequence


Protein


Download         Length: 317 a.a.        Molecular weight: 34885.50 Da        Isoelectric Point: 10.4858

>NTDB_id=1093032 ACMGE7_RS10985 WP_414047311.1 2136957..2137910(-) (ceuB) [Macrococcus sp. 18KM245]
MKMIYGLIALVLLSIVSIFVGVIDISPQHLMHLSDNQKNILINSRFPRTLSIILAGVALSVAGLLMQQLTRNKFVSPTTA
GTMDFAKFGVLISMIFFAQAPLLVKLGFSITTAILGTFMFMWIVNRIKFKDAIFIPLVGLMLGNIVSSLATFMALRFNAM
QSISNFFVGDFSMITKGRYEVLYIIIPMVIIMYFFAHHFTIVGMGELFSKNLGISYNKIMNLGVVIAAVVSATVVVTIGV
LPFLGLIVPNIVGLFVGDHMNKALPYTALLGAIIVMIADIFSRIIIFPYEIPIGLTLGILGSVVFMVILLKRRKEYA

Nucleotide


Download         Length: 954 bp        

>NTDB_id=1093032 ACMGE7_RS10985 WP_414047311.1 2136957..2137910(-) (ceuB) [Macrococcus sp. 18KM245]
ATGAAAATGATTTATGGTCTTATCGCATTAGTATTATTATCGATTGTATCGATTTTTGTAGGAGTGATTGATATTTCACC
GCAACATTTAATGCATTTATCGGACAATCAGAAAAATATTTTAATAAACAGTCGTTTCCCGAGGACGCTCTCTATTATAT
TAGCAGGCGTGGCATTAAGTGTTGCAGGGTTACTAATGCAGCAGCTTACACGTAATAAATTCGTCTCACCGACGACGGCA
GGGACGATGGATTTCGCGAAGTTTGGTGTATTGATATCAATGATTTTCTTTGCACAAGCGCCATTATTAGTGAAACTCGG
CTTTAGTATTACAACTGCAATTTTAGGAACATTTATGTTTATGTGGATTGTTAATCGTATTAAGTTTAAAGATGCGATAT
TCATTCCGCTTGTCGGATTGATGTTGGGTAATATCGTTTCCAGCTTAGCAACATTTATGGCATTAAGATTTAATGCAATG
CAAAGCATTTCTAACTTCTTTGTCGGTGATTTTTCGATGATTACGAAAGGACGTTATGAAGTGCTGTATATCATCATTCC
AATGGTTATTATTATGTATTTCTTTGCACATCACTTTACGATTGTTGGGATGGGAGAGTTATTTAGTAAGAACTTAGGAA
TCTCATACAACAAGATAATGAATCTCGGTGTAGTCATTGCCGCAGTGGTTTCAGCGACTGTCGTTGTAACAATCGGTGTA
TTACCGTTTCTGGGATTAATCGTTCCGAATATCGTTGGACTTTTTGTCGGAGATCATATGAATAAAGCGTTACCGTACAC
TGCGCTTCTCGGTGCGATAATTGTAATGATTGCTGATATATTCAGCCGAATTATTATCTTTCCATACGAAATACCGATAG
GGCTAACGCTAGGTATTTTAGGTAGTGTTGTATTCATGGTCATCCTTCTGAAAAGGAGGAAAGAATATGCATAA

Domains


Predicted by InterproScan.

(10-311)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

49.679

98.423

0.489


Multiple sequence alignment