Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | ACMGE8_RS00335 | Genome accession | NZ_CP179728 |
| Coordinates | 57246..58214 (+) | Length | 322 a.a. |
| NCBI ID | WP_414052464.1 | Uniprot ID | - |
| Organism | Macrococcus sp. 18KM676 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 52246..63214
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACMGE8_RS00295 (ACMGE8_00295) | - | 52281..52847 (+) | 567 | WP_414052461.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| ACMGE8_RS00300 (ACMGE8_00300) | - | 52844..54268 (+) | 1425 | WP_414052462.1 | rhomboid family intramembrane serine protease | - |
| ACMGE8_RS00305 (ACMGE8_00305) | - | 54273..54464 (+) | 192 | WP_414042927.1 | YqgQ family protein | - |
| ACMGE8_RS00310 (ACMGE8_00310) | - | 54461..55432 (+) | 972 | WP_414042928.1 | ROK family glucokinase | - |
| ACMGE8_RS00315 (ACMGE8_00315) | - | 55432..55743 (+) | 312 | WP_414050265.1 | MTH1187 family thiamine-binding protein | - |
| ACMGE8_RS00320 (ACMGE8_00320) | - | 55786..56025 (-) | 240 | WP_414042930.1 | DUF2759 domain-containing protein | - |
| ACMGE8_RS00325 (ACMGE8_00325) | - | 56118..56747 (+) | 630 | WP_414052463.1 | MBL fold metallo-hydrolase | - |
| ACMGE8_RS00330 (ACMGE8_00330) | - | 56786..57034 (-) | 249 | WP_099578437.1 | DUF2626 domain-containing protein | - |
| ACMGE8_RS00335 (ACMGE8_00335) | comGA | 57246..58214 (+) | 969 | WP_414052464.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ACMGE8_RS00340 (ACMGE8_00340) | comGB | 58201..59238 (+) | 1038 | WP_414042933.1 | competence type IV pilus assembly protein ComGB | - |
| ACMGE8_RS00345 (ACMGE8_00345) | comGC | 59250..59609 (+) | 360 | WP_414052465.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ACMGE8_RS00350 (ACMGE8_00350) | - | 59557..60027 (+) | 471 | WP_414052466.1 | hypothetical protein | - |
| ACMGE8_RS00355 (ACMGE8_00355) | - | 60014..60259 (+) | 246 | WP_414042936.1 | hypothetical protein | - |
| ACMGE8_RS00360 (ACMGE8_00360) | comGF | 60231..60653 (+) | 423 | WP_414049758.1 | competence type IV pilus minor pilin ComGF | - |
| ACMGE8_RS00365 (ACMGE8_00365) | - | 60685..60810 (+) | 126 | WP_414052467.1 | hypothetical protein | - |
| ACMGE8_RS00370 (ACMGE8_00370) | - | 60834..61340 (+) | 507 | WP_414042938.1 | shikimate kinase | - |
| ACMGE8_RS00375 (ACMGE8_00375) | gcvT | 61478..62563 (+) | 1086 | WP_414053115.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 322 a.a. Molecular weight: 36609.37 Da Isoelectric Point: 6.4273
>NTDB_id=1092978 ACMGE8_RS00335 WP_414052464.1 57246..58214(+) (comGA) [Macrococcus sp. 18KM676]
MEKTLHILLDDAIERNASDIHFIPGNECVLIKMRIHGDMHDYDTMKVDVFEKLLSYLKFVTHLDVSEKNKAQSGILSYKS
ETMSYNVRTSTLPQSVGHEACVLRMIPSVFKKTIQIEQDLLSLMHKGSGLILISGPTGSGKSTLMYQMLQYAVQHLNKQI
ISIEDPVEQRIEGMVQINVNMKANITYQNSLKAILRCDPDIIMIGEIRDPDTAKNVVNASLSGHLVLTTIHANTCIGALH
RLLEMGVTKVELEQSIEIILNQRLINTSIARKRVYEQMNKKETRLYLNDEDINSYVPISQQLSSMLENNLITQMEYERYA
VE
MEKTLHILLDDAIERNASDIHFIPGNECVLIKMRIHGDMHDYDTMKVDVFEKLLSYLKFVTHLDVSEKNKAQSGILSYKS
ETMSYNVRTSTLPQSVGHEACVLRMIPSVFKKTIQIEQDLLSLMHKGSGLILISGPTGSGKSTLMYQMLQYAVQHLNKQI
ISIEDPVEQRIEGMVQINVNMKANITYQNSLKAILRCDPDIIMIGEIRDPDTAKNVVNASLSGHLVLTTIHANTCIGALH
RLLEMGVTKVELEQSIEIILNQRLINTSIARKRVYEQMNKKETRLYLNDEDINSYVPISQQLSSMLENNLITQMEYERYA
VE
Nucleotide
Download Length: 969 bp
>NTDB_id=1092978 ACMGE8_RS00335 WP_414052464.1 57246..58214(+) (comGA) [Macrococcus sp. 18KM676]
ATGGAAAAAACACTACATATATTATTGGATGATGCAATAGAACGTAACGCTTCGGATATTCATTTTATACCTGGTAATGA
ATGTGTGCTTATAAAAATGCGAATACATGGAGATATGCATGACTATGACACGATGAAAGTTGATGTATTCGAGAAATTAT
TATCATATTTAAAGTTTGTAACTCATCTTGATGTTTCAGAAAAAAACAAAGCACAAAGTGGAATATTGTCGTACAAAAGT
GAAACTATGTCATACAATGTTAGAACATCAACGTTGCCACAGTCTGTCGGCCATGAAGCATGCGTGTTAAGAATGATTCC
GTCTGTATTTAAAAAAACGATACAAATTGAGCAAGATTTGTTATCTCTAATGCATAAAGGGAGTGGCTTAATTTTAATCA
GTGGACCAACTGGAAGTGGGAAAAGTACCTTAATGTATCAAATGTTACAATATGCAGTACAACATTTGAATAAACAAATC
ATTTCGATTGAAGATCCTGTAGAGCAACGTATAGAAGGAATGGTTCAAATTAATGTGAATATGAAAGCAAATATTACTTA
TCAAAATTCACTAAAAGCGATATTACGTTGCGATCCAGATATTATTATGATTGGAGAAATTCGCGATCCTGACACTGCGA
AAAATGTTGTGAATGCAAGTTTAAGTGGACATTTAGTGTTAACGACCATTCATGCTAATACATGTATAGGTGCACTTCAT
CGCTTATTAGAAATGGGTGTCACGAAAGTTGAACTTGAACAAAGTATTGAAATAATACTCAATCAACGATTAATAAATAC
TAGTATTGCTCGAAAAAGAGTTTATGAACAAATGAATAAAAAAGAAACGAGACTCTATTTAAATGATGAAGACATTAATT
CGTATGTACCGATTAGTCAACAGCTATCCTCAATGCTGGAAAATAATTTGATAACTCAGATGGAGTATGAACGTTATGCT
GTGGAGTAA
ATGGAAAAAACACTACATATATTATTGGATGATGCAATAGAACGTAACGCTTCGGATATTCATTTTATACCTGGTAATGA
ATGTGTGCTTATAAAAATGCGAATACATGGAGATATGCATGACTATGACACGATGAAAGTTGATGTATTCGAGAAATTAT
TATCATATTTAAAGTTTGTAACTCATCTTGATGTTTCAGAAAAAAACAAAGCACAAAGTGGAATATTGTCGTACAAAAGT
GAAACTATGTCATACAATGTTAGAACATCAACGTTGCCACAGTCTGTCGGCCATGAAGCATGCGTGTTAAGAATGATTCC
GTCTGTATTTAAAAAAACGATACAAATTGAGCAAGATTTGTTATCTCTAATGCATAAAGGGAGTGGCTTAATTTTAATCA
GTGGACCAACTGGAAGTGGGAAAAGTACCTTAATGTATCAAATGTTACAATATGCAGTACAACATTTGAATAAACAAATC
ATTTCGATTGAAGATCCTGTAGAGCAACGTATAGAAGGAATGGTTCAAATTAATGTGAATATGAAAGCAAATATTACTTA
TCAAAATTCACTAAAAGCGATATTACGTTGCGATCCAGATATTATTATGATTGGAGAAATTCGCGATCCTGACACTGCGA
AAAATGTTGTGAATGCAAGTTTAAGTGGACATTTAGTGTTAACGACCATTCATGCTAATACATGTATAGGTGCACTTCAT
CGCTTATTAGAAATGGGTGTCACGAAAGTTGAACTTGAACAAAGTATTGAAATAATACTCAATCAACGATTAATAAATAC
TAGTATTGCTCGAAAAAGAGTTTATGAACAAATGAATAAAAAAGAAACGAGACTCTATTTAAATGATGAAGACATTAATT
CGTATGTACCGATTAGTCAACAGCTATCCTCAATGCTGGAAAATAATTTGATAACTCAGATGGAGTATGAACGTTATGCT
GTGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
49.371 |
98.758 |
0.488 |
| comGA | Staphylococcus aureus N315 |
49.371 |
98.758 |
0.488 |