Detailed information NTG1092927

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: ACMGFA_RS07625
• Genome accession: NZ_CP179725
• Coordinates: 1417277..1419700 (-)
• Length: 807 a.a.
• NCBI ID: WP_414049859.1
• Uniprot ID: -
• Organism: Macrococcus sp. JEK85
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1412277..1424700

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACMGFA_RS07605 (ACMGFA_07605)	-	1413315..1413641 (-)	327	WP_414049856.1	DUF1292 domain-containing protein	-
ACMGFA_RS07610 (ACMGFA_07610)	ruvX	1413656..1414075 (-)	420	WP_414042861.1	Holliday junction resolvase RuvX	-
ACMGFA_RS07615 (ACMGFA_07615)	-	1414068..1414337 (-)	270	WP_414042860.1	IreB family regulatory phosphoprotein	-
ACMGFA_RS07620 (ACMGFA_07620)	alaS	1414399..1417023 (-)	2625	WP_414050283.1	alanine--tRNA ligase	-
ACMGFA_RS07625 (ACMGFA_07625)	recD2	1417277..1419700 (-)	2424	WP_414049859.1	ATP-dependent RecD-like DNA helicase	Machinery gene
ACMGFA_RS07630 (ACMGFA_07630)	-	1419704..1420366 (-)	663	WP_414042857.1	tetratricopeptide repeat protein	-
ACMGFA_RS07635 (ACMGFA_07635)	mnmA	1420445..1421560 (-)	1116	WP_414050284.1	tRNA 2-thiouridine(34) synthase MnmA	-
ACMGFA_RS07640 (ACMGFA_07640)	-	1421566..1422705 (-)	1140	WP_414049988.1	cysteine desulfurase family protein	-
ACMGFA_RS07645 (ACMGFA_07645)	-	1422862..1423752 (+)	891	WP_414050285.1	NERD domain-containing protein	-

Sequence

Protein

• Length: 807 a.a.
• Molecular weight: 91772.38 Da
• Isoelectric Point: 4.5189

>NTDB_id=1092927 ACMGFA_RS07625 WP_414049859.1 1417277..1419700(-) (recD2) [Macrococcus sp. JEK85]
MENATLFDQSYVKGTIIRILFQNNDNFYTVLKAEVIDTNEDFDDEVTVTGFLPQIAEGDTYTFTGKLVTHAKYGKQLQAD
KFEKDLPQSKDGIIHYLSSDLFKGVGKKTARTIVEMLGEDALNIILDDKSSLDKIPKLAREKKDLIYNTINENQAIEKVM
IQLNDWGFGPQLAMKIYQFYKEETIRIINESPYQLVMDIDGIGFNKADELARQIGIDNNHPERLKAALVYGIEQASLQNG
HTYIPDQILLETSYELLTKNGSQVDPDALVIALTELCEIKEKLVEHEKNIYIPSLFYSETKTVQILYRLMNHKEQLKQFE
QSEVMLAIGEIEQLFEVTYAEKQKEALMQAMNSKLMILSGGPGTGKTTVVRGIVTLYAELHGLSLDYDDYDGQDFPIVVA
APTGRASKRLYESTGLEATTIHRLIGWTRENKPDDILENEITAKLIIIDEMSMVDTWLMFQLMKAVPNDAQIIFVGDQDQ
LPSVGPGQVFKDLIESQIMPQIELNEVYRQQEGSSIVELAHQIKRNEPFDITKRYSDRSFIPCSTDQIPEVIEKIVTSAV
NKGYDMRDIQVLAPIYRGNAGIRALNKVLQKILNPADEKVREMEFGDVIYRNHDKVLQLVNRPEDGVFNGDIGEIVGIFK
AAENALNKDVVIVDYDGNEVTYTKADLIEITHAYCCSIHKSQGSEFPIVIMPVVNQYYRMLQKNILYTGLTRAKQSLIFC
GDVNAFNSGIKRLGNARFTSFYQFLLDYFSKDEQKELSDENADDNSDENEDKHSNRLPFKVGEMTEENMHLVSPMINMED
ITPFDYL

Nucleotide

• Length: 2424 bp

>NTDB_id=1092927 ACMGFA_RS07625 WP_414049859.1 1417277..1419700(-) (recD2) [Macrococcus sp. JEK85]
TTGGAGAACGCCACTTTGTTTGATCAATCTTACGTGAAAGGCACAATTATCCGTATACTTTTTCAAAATAACGATAACTT
TTATACGGTATTAAAAGCCGAAGTGATCGATACAAATGAAGATTTTGATGATGAAGTGACGGTCACAGGTTTCCTCCCTC
AAATCGCAGAGGGTGATACCTATACATTCACAGGTAAACTTGTAACACACGCGAAATATGGTAAACAACTTCAAGCTGAC
AAGTTTGAGAAAGACTTACCGCAATCTAAAGATGGCATCATTCATTATTTATCAAGTGATTTATTTAAAGGTGTGGGTAA
AAAGACTGCGAGAACAATTGTGGAAATGTTAGGTGAGGATGCACTCAATATCATTTTGGATGATAAATCGAGTTTAGATA
AAATTCCTAAACTAGCTCGAGAAAAAAAGGATTTAATCTATAACACAATCAATGAAAATCAAGCTATTGAAAAAGTGATG
ATTCAACTTAATGATTGGGGATTTGGTCCTCAACTTGCAATGAAAATTTATCAATTTTACAAGGAAGAGACGATAAGGAT
TATTAATGAATCACCATATCAACTGGTGATGGATATAGACGGGATAGGATTCAATAAAGCGGATGAACTGGCCCGTCAAA
TTGGTATAGATAACAATCATCCAGAACGTCTGAAAGCAGCATTAGTTTATGGCATTGAACAAGCTTCATTACAAAATGGT
CATACGTATATTCCAGATCAAATATTACTGGAAACAAGTTACGAATTACTGACTAAAAATGGCTCTCAAGTTGACCCTGA
TGCACTTGTTATTGCACTGACTGAACTTTGTGAGATAAAAGAAAAGTTAGTTGAACACGAAAAAAATATTTATATTCCAA
GTTTGTTTTATTCTGAAACCAAAACAGTTCAGATTTTATATCGTTTGATGAATCATAAAGAACAACTTAAGCAATTCGAG
CAGTCTGAAGTAATGCTTGCAATTGGTGAAATTGAACAGTTATTTGAAGTGACATATGCTGAAAAACAAAAAGAAGCATT
AATGCAAGCGATGAATAGTAAGTTGATGATTCTTTCAGGTGGGCCAGGTACTGGTAAAACGACTGTCGTTCGTGGTATTG
TCACACTCTATGCCGAACTTCATGGACTAAGTCTTGATTATGATGATTACGACGGGCAAGACTTTCCAATAGTAGTGGCC
GCACCAACAGGTAGAGCATCCAAAAGGTTATATGAATCAACAGGACTTGAAGCGACAACGATTCATCGATTAATCGGCTG
GACACGTGAAAATAAACCAGACGATATATTAGAAAATGAAATTACTGCAAAATTGATTATTATTGACGAAATGTCGATGG
TTGATACATGGTTGATGTTCCAATTGATGAAGGCTGTCCCCAATGATGCACAAATCATCTTTGTTGGAGACCAGGATCAA
TTGCCTTCAGTTGGTCCTGGGCAAGTATTCAAAGATTTAATTGAGTCTCAAATTATGCCGCAAATCGAACTCAATGAAGT
GTATCGTCAACAAGAGGGGTCTTCTATTGTTGAACTTGCTCATCAAATCAAACGTAATGAACCGTTCGATATTACGAAGC
GTTATAGTGATCGTAGTTTTATTCCTTGTTCAACAGATCAGATTCCTGAAGTTATTGAAAAAATTGTAACTTCAGCTGTT
AACAAAGGATATGATATGCGCGATATACAAGTACTCGCGCCAATTTATCGTGGAAATGCAGGGATTCGTGCACTCAATAA
AGTATTACAAAAAATCTTAAACCCTGCAGATGAAAAAGTACGTGAAATGGAGTTTGGCGATGTTATCTATCGTAATCATG
ATAAAGTATTACAATTGGTCAATCGACCTGAAGACGGTGTATTTAATGGGGATATTGGAGAAATCGTTGGCATCTTTAAA
GCAGCTGAAAATGCGCTGAATAAAGATGTTGTCATTGTGGATTATGATGGTAATGAGGTAACGTATACGAAGGCAGATTT
AATTGAAATTACACATGCGTATTGCTGCTCAATTCACAAATCACAAGGCTCTGAATTTCCAATTGTTATTATGCCAGTCG
TGAATCAATATTATAGAATGTTACAGAAGAATATATTATATACAGGCTTAACACGGGCCAAACAGTCATTGATTTTTTGT
GGTGACGTGAATGCATTTAATTCTGGGATTAAACGACTCGGAAACGCTAGATTTACGTCATTTTATCAATTTCTACTCGA
TTACTTTAGTAAGGATGAGCAAAAAGAATTAAGTGATGAAAACGCGGATGACAATTCTGATGAAAACGAAGATAAGCATT
CAAATAGACTGCCATTTAAAGTCGGTGAAATGACCGAAGAAAATATGCATCTCGTGTCACCAATGATTAATATGGAAGAT
ATTACGCCGTTTGATTATCTTTAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (152-243)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (672-719)

• AAA domain (AAA_30) (339-545)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (585-653)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	50.246	100	0.506