Detailed information NTG1092836

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: ACK25W_RS05340
• Genome accession: NZ_CP179722
• Coordinates: 1094552..1095514 (+)
• Length: 320 a.a.
• NCBI ID: WP_034663299.1
• Uniprot ID: -
• Organism: Bacillus pumilus strain FJAT-56819
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1089552..1100514

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACK25W_RS05310 (ACK25W_05310)	argF	1089883..1090833 (+)	951	WP_106039528.1	ornithine carbamoyltransferase	-
ACK25W_RS05315 (ACK25W_05315)	-	1090936..1091115 (+)	180	WP_034663316.1	YjzC family protein	-
ACK25W_RS05320 (ACK25W_05320)	-	1091283..1092548 (+)	1266	WP_034663308.1	MFS transporter	-
ACK25W_RS05325 (ACK25W_05325)	-	1092667..1092861 (-)	195	WP_414051802.1	YjzD family protein	-
ACK25W_RS05330 (ACK25W_05330)	-	1093073..1093813 (+)	741	WP_414051803.1	hypothetical protein	-
ACK25W_RS05335 (ACK25W_05335)	-	1093889..1094461 (+)	573	WP_106041568.1	nad binding enzyme	-
ACK25W_RS05340 (ACK25W_05340)	med	1094552..1095514 (+)	963	WP_034663299.1	BMP family ABC transporter substrate-binding protein	Regulator
ACK25W_RS05345 (ACK25W_05345)	comZ	1095525..1095722 (+)	198	WP_003211983.1	ComZ family protein	Regulator
ACK25W_RS05350 (ACK25W_05350)	-	1095732..1095965 (-)	234	WP_034663296.1	hypothetical protein	-
ACK25W_RS05355 (ACK25W_05355)	-	1096135..1097073 (+)	939	WP_012009552.1	beta-ketoacyl-ACP synthase III	-
ACK25W_RS05360 (ACK25W_05360)	fabF	1097095..1098336 (+)	1242	WP_060595995.1	beta-ketoacyl-ACP synthase II	-
ACK25W_RS05365 (ACK25W_05365)	-	1098414..1099208 (+)	795	WP_060595996.1	DUF2268 domain-containing protein	-
ACK25W_RS05370 (ACK25W_05370)	-	1099377..1100357 (+)	981	WP_045210037.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 320 a.a.
• Molecular weight: 35693.57 Da
• Isoelectric Point: 5.2616

>NTDB_id=1092836 ACK25W_RS05340 WP_034663299.1 1094552..1095514(+) (med) [Bacillus pumilus strain FJAT-56819]
MKYQRLVMIFSFLLLLSACSQAPLKGQIEKVGLLVPDTINDQVWGTKGYKGLLNIQSTFGVDVYYKEGMVDKEKIVDAIE
EFHKKGVNLIIGHGNEYSEIFNLISEDYPKTQFITVNGNKPQADNVANVTFKGEAMGFFGGMTAAHMSKSKKIGILATYD
WQSEVDGFIKGAKYQDEHVQVLAEFVENWDDADKAVELYQKLKKQGVDVVYPAGDGYNIPVIEQIKADNLSAIGYVTDQS
NLGSHTVLTSTVQHVDKAYTIIAKKFNEGKLNEQGDYSFDFKEGVIEMGKFSSTIDRAFVKDIESDIATYKKTGKLPNEK

Nucleotide

• Length: 963 bp

>NTDB_id=1092836 ACK25W_RS05340 WP_034663299.1 1094552..1095514(+) (med) [Bacillus pumilus strain FJAT-56819]
ATGAAGTATCAGCGGCTTGTCATGATCTTTTCGTTCCTTCTCCTATTATCTGCCTGCTCACAGGCACCTTTAAAAGGACA
GATTGAGAAGGTGGGTTTACTCGTCCCCGATACAATTAATGATCAAGTTTGGGGAACGAAAGGTTATAAAGGCTTATTAA
ATATTCAATCAACATTTGGTGTAGATGTTTATTATAAGGAAGGAATGGTCGACAAAGAGAAAATCGTTGATGCCATTGAA
GAATTTCACAAAAAAGGAGTCAATTTGATTATTGGCCATGGCAATGAATACAGCGAAATTTTCAACTTAATTAGTGAAGA
TTATCCGAAAACACAATTTATCACGGTAAATGGAAACAAGCCTCAGGCGGATAATGTCGCGAATGTGACGTTTAAAGGTG
AAGCGATGGGCTTTTTCGGAGGCATGACAGCAGCACATATGTCAAAATCAAAAAAGATTGGTATTCTTGCTACATATGAT
TGGCAAAGCGAAGTAGATGGCTTTATCAAAGGTGCAAAATATCAAGATGAACATGTACAAGTGCTTGCCGAGTTTGTCGA
AAACTGGGATGATGCTGACAAAGCCGTGGAGCTCTATCAAAAATTGAAAAAGCAGGGCGTAGATGTTGTATATCCAGCAG
GCGATGGTTATAATATCCCTGTCATTGAACAAATCAAAGCCGATAATTTATCAGCGATCGGATATGTCACTGATCAATCC
AACCTCGGCAGTCATACCGTCTTAACAAGCACAGTCCAGCATGTGGATAAAGCGTACACTATTATTGCGAAGAAATTTAA
TGAAGGCAAGCTAAACGAACAAGGTGACTACTCCTTTGATTTTAAAGAAGGAGTGATCGAAATGGGGAAATTTAGTTCCA
CCATTGACCGTGCTTTTGTGAAAGATATTGAAAGTGATATTGCGACTTACAAAAAAACTGGCAAACTGCCAAATGAAAAG
TGA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (28-318)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	64.537	97.813	0.631