Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ACMFG3_RS08445 | Genome accession | NZ_CP179709 |
| Coordinates | 1779638..1780018 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain PR1 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1774638..1785018
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACMFG3_RS08415 (ACMFG3_08415) | kdsB | 1775541..1776302 (+) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| ACMFG3_RS08420 (ACMFG3_08420) | - | 1776314..1777294 (+) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| ACMFG3_RS08425 (ACMFG3_08425) | - | 1777306..1777647 (+) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| ACMFG3_RS08430 (ACMFG3_08430) | - | 1777665..1778438 (+) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| ACMFG3_RS08435 (ACMFG3_08435) | - | 1778476..1779084 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| ACMFG3_RS08440 (ACMFG3_08440) | - | 1779094..1779648 (+) | 555 | WP_000841373.1 | type II secretion system protein | - |
| ACMFG3_RS08445 (ACMFG3_08445) | xcpV | 1779638..1780018 (+) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ACMFG3_RS08450 (ACMFG3_08450) | xcpW | 1780018..1780719 (+) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ACMFG3_RS08455 (ACMFG3_08455) | gspK | 1780719..1781678 (+) | 960 | WP_000301476.1 | type II secretion system minor pseudopilin GspK | - |
| ACMFG3_RS08460 (ACMFG3_08460) | - | 1781909..1782505 (+) | 597 | WP_000908452.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| ACMFG3_RS08465 (ACMFG3_08465) | ung | 1782556..1783269 (+) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| ACMFG3_RS08470 (ACMFG3_08470) | - | 1783266..1784390 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ACMFG3_RS08475 (ACMFG3_08475) | tadA | 1784397..1784900 (+) | 504 | WP_000033178.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=1092779 ACMFG3_RS08445 WP_000836911.1 1779638..1780018(+) (xcpV) [Acinetobacter baumannii strain PR1]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=1092779 ACMFG3_RS08445 WP_000836911.1 1779638..1780018(+) (xcpV) [Acinetobacter baumannii strain PR1]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |