Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ACMFG5_RS08590 | Genome accession | NZ_CP179707 |
| Coordinates | 1797544..1797924 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain PR2 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1792544..1802924
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACMFG5_RS08560 (ACMFG5_08560) | kdsB | 1793447..1794208 (+) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| ACMFG5_RS08565 (ACMFG5_08565) | - | 1794220..1795200 (+) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| ACMFG5_RS08570 (ACMFG5_08570) | - | 1795212..1795553 (+) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| ACMFG5_RS08575 (ACMFG5_08575) | - | 1795571..1796344 (+) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| ACMFG5_RS08580 (ACMFG5_08580) | - | 1796382..1796990 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| ACMFG5_RS08585 (ACMFG5_08585) | - | 1797000..1797554 (+) | 555 | WP_000841373.1 | type II secretion system protein | - |
| ACMFG5_RS08590 (ACMFG5_08590) | xcpV | 1797544..1797924 (+) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ACMFG5_RS08595 (ACMFG5_08595) | xcpW | 1797924..1798625 (+) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ACMFG5_RS08600 (ACMFG5_08600) | gspK | 1798625..1799584 (+) | 960 | WP_000301476.1 | type II secretion system minor pseudopilin GspK | - |
| ACMFG5_RS08605 (ACMFG5_08605) | - | 1799815..1800411 (+) | 597 | WP_000908452.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| ACMFG5_RS08610 (ACMFG5_08610) | ung | 1800462..1801175 (+) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| ACMFG5_RS08615 (ACMFG5_08615) | - | 1801172..1802296 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ACMFG5_RS08620 (ACMFG5_08620) | tadA | 1802303..1802806 (+) | 504 | WP_000033178.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=1092735 ACMFG5_RS08590 WP_000836911.1 1797544..1797924(+) (xcpV) [Acinetobacter baumannii strain PR2]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=1092735 ACMFG5_RS08590 WP_000836911.1 1797544..1797924(+) (xcpV) [Acinetobacter baumannii strain PR2]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |