Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | ACMFG6_RS02055 | Genome accession | NZ_CP179699 |
| Coordinates | 431587..432060 (+) | Length | 157 a.a. |
| NCBI ID | WP_001214061.1 | Uniprot ID | A0A219CC01 |
| Organism | Acinetobacter baumannii strain PR5 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 426587..437060
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACMFG6_RS02030 (ACMFG6_02030) | - | 427051..429156 (-) | 2106 | WP_001117590.1 | RelA/SpoT family protein | - |
| ACMFG6_RS02035 (ACMFG6_02035) | - | 429196..429325 (-) | 130 | Protein_386 | hypothetical protein | - |
| ACMFG6_RS02040 (ACMFG6_02040) | rpoZ | 429364..429642 (-) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| ACMFG6_RS02045 (ACMFG6_02045) | gmk | 429715..430344 (-) | 630 | WP_000015937.1 | guanylate kinase | - |
| ACMFG6_RS02050 (ACMFG6_02050) | ispH | 430467..431417 (+) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| ACMFG6_RS02055 (ACMFG6_02055) | fimU | 431587..432060 (+) | 474 | WP_001214061.1 | pilus assembly FimT family protein | Machinery gene |
| ACMFG6_RS02060 (ACMFG6_02060) | pilV | 432054..432614 (+) | 561 | WP_085916952.1 | type IV pilus modification protein PilV | Machinery gene |
| ACMFG6_RS02065 (ACMFG6_02065) | pilW | 432615..433616 (+) | 1002 | WP_000079200.1 | PilW family protein | Machinery gene |
| ACMFG6_RS02070 (ACMFG6_02070) | pilX | 433613..434431 (+) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16836.40 Da Isoelectric Point: 8.5355
>NTDB_id=1092580 ACMFG6_RS02055 WP_001214061.1 431587..432060(+) (fimU) [Acinetobacter baumannii strain PR5]
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILSKLGTLVFKAEENC
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILSKLGTLVFKAEENC
Nucleotide
Download Length: 474 bp
>NTDB_id=1092580 ACMFG6_RS02055 WP_001214061.1 431587..432060(+) (fimU) [Acinetobacter baumannii strain PR5]
ATGAGGGGAATTATTCCACAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCACCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACTACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGTCCAAGCTTGGCACTTTGGTTTTTAAGGCCGAGGAGAATTGTTAA
ATGAGGGGAATTATTCCACAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCACCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACTACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGTCCAAGCTTGGCACTTTGGTTTTTAAGGCCGAGGAGAATTGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
98.726 |
100 |
0.987 |