Detailed information NTG1092568

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ACLSSQ_RS16940
• Genome accession: NZ_CP179682
• Coordinates: 3559285..3560289 (+)
• Length: 334 a.a.
• NCBI ID: WP_416243321.1
• Uniprot ID: -
• Organism: Azospira sp. APE16
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3554285..3565289

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLSSQ_RS16915 (ACLSSQ_16915)	-	3555071..3555328 (-)	258	WP_014236133.1	YfhL family 4Fe-4S dicluster ferredoxin	-
ACLSSQ_RS16920 (ACLSSQ_16920)	coaD	3555345..3555842 (-)	498	WP_014236132.1	pantetheine-phosphate adenylyltransferase	-
ACLSSQ_RS16925 (ACLSSQ_16925)	rsmD	3555832..3556440 (-)	609	WP_416243318.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ACLSSQ_RS16930 (ACLSSQ_16930)	-	3556440..3557735 (-)	1296	WP_416243319.1	M16 family metallopeptidase	-
ACLSSQ_RS16935 (ACLSSQ_16935)	-	3557747..3559114 (-)	1368	WP_416243320.1	M16 family metallopeptidase	-
ACLSSQ_RS16940 (ACLSSQ_16940)	pilA	3559285..3560289 (+)	1005	WP_416243321.1	signal recognition particle-docking protein FtsY	Machinery gene
ACLSSQ_RS16945 (ACLSSQ_16945)	-	3560302..3560982 (+)	681	WP_014236127.1	cell division ATP-binding protein FtsE	-
ACLSSQ_RS16950 (ACLSSQ_16950)	ftsX	3560979..3561884 (+)	906	WP_014236126.1	permease-like cell division protein FtsX	-
ACLSSQ_RS16955 (ACLSSQ_16955)	-	3562093..3563427 (+)	1335	WP_416243322.1	FAD-dependent oxidoreductase	-
ACLSSQ_RS16960 (ACLSSQ_16960)	-	3563514..3564026 (-)	513	WP_416243323.1	hypothetical protein	-
ACLSSQ_RS16965 (ACLSSQ_16965)	-	3564097..3564561 (-)	465	WP_416243324.1	hypothetical protein	-
ACLSSQ_RS16970 (ACLSSQ_16970)	-	3564754..3565098 (-)	345	WP_416243325.1	hypothetical protein	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 35638.17 Da
• Isoelectric Point: 6.8844

>NTDB_id=1092568 ACLSSQ_RS16940 WP_416243321.1 3559285..3560289(+) (pilA) [Azospira sp. APE16]
MFGFLKKSDKDQDATPATAAAVAPVPEPLDKPLSWRERLFAGLSRTRSQLGGKLKSVFARGKVDDELLEELETLLLTSDV
GMDATMHLLDELKRRAKQDKLEGAAAIQQALADTLAQMLAPLEAPLQVDSHKPFVIMIAGVNGAGKTTSIGKLAKYFQGQ
GKSVLLAAGDTFRAAAREQLMTWGERNNVTVIAQESGDPAAVVFDAIAAAKARGIDVVLADTAGRLPTQLHLMEEIAKVR
RVIQKADPTGPHEVMLVLDANIGQNALAQVKAFDKSINVTGLVLTKLDGTAKGGVIAAIARQCPKPVRFIGVGEGIDDLR
PFVARDFVDALFGD

Nucleotide

• Length: 1005 bp

>NTDB_id=1092568 ACLSSQ_RS16940 WP_416243321.1 3559285..3560289(+) (pilA) [Azospira sp. APE16]
ATGTTTGGTTTCTTGAAAAAATCCGACAAAGACCAGGACGCCACGCCCGCCACCGCAGCCGCCGTGGCGCCGGTGCCGGA
GCCCCTGGACAAGCCGCTCTCCTGGCGCGAGCGCCTTTTCGCCGGCCTCTCCCGCACCCGCTCCCAGCTTGGCGGCAAGC
TCAAGTCCGTCTTTGCCCGAGGCAAGGTGGACGACGAACTGCTGGAAGAACTGGAGACCCTGTTGCTGACCAGCGACGTG
GGCATGGACGCCACCATGCACCTGCTCGACGAACTGAAGCGCCGCGCCAAGCAGGACAAGCTGGAAGGCGCCGCCGCCAT
CCAGCAGGCCCTGGCCGACACCCTGGCCCAGATGCTGGCGCCCCTGGAAGCGCCCCTGCAGGTGGATAGCCACAAGCCCT
TCGTGATCATGATTGCCGGGGTCAACGGCGCCGGCAAGACCACCTCCATCGGCAAGCTGGCCAAGTACTTCCAGGGCCAG
GGCAAGAGCGTGCTGCTGGCCGCCGGCGACACCTTCCGCGCCGCTGCCCGGGAACAGCTGATGACCTGGGGCGAGCGCAA
CAACGTCACGGTCATCGCCCAGGAATCCGGCGACCCGGCGGCCGTGGTCTTCGATGCCATCGCCGCCGCCAAGGCCCGGG
GCATCGACGTGGTGCTGGCTGACACCGCCGGCCGCCTGCCCACCCAGCTGCACCTCATGGAAGAGATCGCCAAGGTGCGC
CGGGTGATCCAGAAGGCCGACCCCACCGGCCCCCACGAGGTGATGCTGGTGCTGGATGCCAACATCGGCCAGAACGCCCT
GGCCCAGGTGAAGGCCTTCGACAAGTCCATCAACGTCACCGGCCTGGTGCTGACCAAGCTGGACGGCACCGCCAAGGGCG
GCGTCATCGCCGCCATCGCCCGCCAGTGTCCCAAGCCGGTGCGCTTCATCGGCGTCGGCGAAGGCATCGACGACCTGCGC
CCCTTCGTCGCCCGGGACTTCGTGGACGCCCTCTTCGGCGACTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (50-115)

• SRP54-type protein, GTPase domain (SRP54) (133-332)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	63.158	91.018	0.575