Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   ACGHZ1_RS07800 Genome accession   NZ_AP031416
Coordinates   1711886..1713730 (+) Length   614 a.a.
NCBI ID   WP_018598360.1    Uniprot ID   -
Organism   Blautia coccoides strain f32     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1706886..1718730
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACGHZ1_RS07785 (F320042A7_15290) - 1707636..1709024 (+) 1389 WP_257414188.1 MATE family efflux transporter -
  ACGHZ1_RS07790 (F320042A7_15310) - 1709275..1709709 (+) 435 WP_018598362.1 MarR family winged helix-turn-helix transcriptional regulator -
  ACGHZ1_RS07795 (F320042A7_15320) - 1709728..1711893 (+) 2166 WP_257414187.1 ABC transporter ATP-binding protein -
  ACGHZ1_RS07800 (F320042A7_15330) rcrQ 1711886..1713730 (+) 1845 WP_018598360.1 ABC transporter ATP-binding protein Regulator
  ACGHZ1_RS07805 (F320042A7_15340) aroF 1714274..1715284 (+) 1011 WP_390603490.1 3-deoxy-7-phosphoheptulonate synthase -
  ACGHZ1_RS07810 (F320042A7_15350) - 1715289..1717496 (+) 2208 WP_257414186.1 DNA topoisomerase III -
  ACGHZ1_RS07815 (F320042A7_15360) - 1717567..1717920 (-) 354 WP_018598356.1 metalloregulator ArsR/SmtB family transcription factor -

Sequence

Protein


Download         Length: 614 a.a.        Molecular weight: 68601.48 Da        Isoelectric Point: 7.0121

>NTDB_id=109203 ACGHZ1_RS07800 WP_018598360.1 1711886..1713730(+) (rcrQ) [Blautia coccoides strain f32]
MSDTARRPRGPMGGHGKGMPGEKAKDFKGAMMRLVKYMERYKFRLILMVLFAVGGTVFNIVGPKILGKATTELFNGLVSK
INGGSGINFDKIVQILLACLCLYLVSALLSFIQGFIMTGISNDVTYSLRKDISQKINRIPMKYFESRTHGEILSRITNDV
DTLQMGINQSVTQLITSCTTLIGVLVMMLSINVWMTLAALLILPISMAIISKVMKHSQKYFQAQQKYLGEVNGQVEEIYS
GHNVVKAFNKEESVISEFEKTNEKLYSSAWRSQFFSGMMMPIMQFVGNLGYVMVALLGGFMVIKSKIEVGDVQAFFQYIR
NFTQPIQQIAQVTNMLQSSAAASERVFEFLDVEEEEQTVENPADVSHVDGNVEIRHTSFGYDPNKIIIHDFSADIKAGQK
VAIVGPTGAGKTTMIKLLMRFYDVNSGEILIDGHNIKDFNRSELRELFGMVLQDTWLFHGTIMENIRYGRLDATDEEVIA
AAKAAHAHHFIMSQPGGYQMVLNEETNNISQGQKQLLTIARAILADNRLLILDEATSSVDTRTEERIQKAMDNLMKGRTS
FVIAHRLSTIRDADLILVMKDGDIIEQGTHKALLEAGGFYANLYNSQFEKAEAM

Nucleotide


Download         Length: 1845 bp        

>NTDB_id=109203 ACGHZ1_RS07800 WP_018598360.1 1711886..1713730(+) (rcrQ) [Blautia coccoides strain f32]
ATGAGTGATACAGCGAGAAGACCGAGAGGGCCGATGGGTGGTCACGGAAAAGGAATGCCGGGCGAGAAGGCAAAAGATTT
TAAGGGTGCCATGATGCGTCTGGTGAAATATATGGAGCGGTATAAGTTCAGGCTGATACTGATGGTCCTGTTTGCCGTAG
GCGGTACGGTATTTAATATTGTGGGGCCTAAGATTTTAGGTAAGGCTACCACTGAACTGTTTAACGGACTGGTATCCAAG
ATAAACGGCGGCAGCGGAATCAATTTTGACAAGATTGTTCAGATCCTTTTGGCATGCCTCTGTCTGTACCTGGTCAGCGC
CCTGCTGTCCTTTATCCAGGGATTTATTATGACAGGGATATCAAATGATGTCACATACAGCCTGAGAAAAGACATCTCCC
AGAAGATCAACAGAATTCCCATGAAATATTTTGAGAGCAGGACCCACGGTGAGATCCTCTCAAGGATCACCAATGATGTG
GATACCCTGCAGATGGGTATCAACCAGAGTGTAACCCAGCTCATCACGTCCTGCACCACGCTCATAGGCGTGCTTGTGAT
GATGCTGAGTATCAATGTATGGATGACACTGGCGGCACTGCTGATCCTTCCTATCTCAATGGCGATCATCAGCAAGGTCA
TGAAGCATTCACAAAAGTATTTCCAGGCACAGCAGAAGTATCTGGGTGAAGTAAACGGACAGGTGGAGGAGATTTACAGC
GGACATAATGTTGTAAAGGCATTCAACAAGGAAGAGTCCGTGATCAGCGAATTTGAGAAGACCAATGAAAAGCTGTACAG
CTCTGCATGGCGCTCTCAATTTTTCTCCGGTATGATGATGCCTATCATGCAGTTTGTGGGTAACCTGGGATATGTGATGG
TTGCTCTGCTGGGCGGATTCATGGTGATCAAGAGCAAGATTGAAGTAGGTGATGTGCAGGCGTTTTTCCAGTATATCAGA
AACTTCACACAGCCTATCCAGCAGATCGCCCAGGTGACAAATATGCTGCAGTCCTCGGCAGCGGCATCTGAGAGAGTGTT
TGAATTCCTGGATGTTGAGGAGGAAGAGCAGACAGTGGAAAACCCGGCAGATGTCAGCCATGTTGACGGCAATGTGGAAA
TCCGCCACACATCATTTGGATATGACCCCAATAAGATCATTATCCATGACTTCTCCGCAGATATAAAAGCAGGGCAGAAG
GTGGCTATTGTGGGTCCCACAGGTGCCGGCAAGACAACCATGATCAAACTGCTGATGCGGTTCTATGATGTCAATTCCGG
AGAGATCCTGATCGATGGTCATAACATCAAGGACTTTAACAGAAGTGAGCTGCGTGAGCTGTTTGGTATGGTCCTGCAGG
ATACCTGGCTGTTCCACGGAACAATTATGGAAAATATCCGCTATGGCCGTCTGGATGCCACAGATGAAGAGGTCATCGCA
GCGGCAAAGGCAGCACATGCCCATCACTTTATCATGTCACAGCCCGGTGGTTATCAGATGGTGCTGAACGAAGAGACAAA
CAATATCTCCCAGGGACAGAAACAGCTTCTGACCATTGCCAGAGCAATTCTGGCGGATAACAGGCTGCTGATCCTGGATG
AAGCTACTTCCTCTGTGGATACAAGAACAGAAGAGCGTATCCAAAAGGCCATGGATAATCTGATGAAGGGTAGAACCAGT
TTTGTGATCGCCCACAGGCTGTCCACTATCCGGGATGCGGATCTGATCCTTGTTATGAAAGACGGAGATATTATTGAACA
GGGAACTCATAAAGCCTTGCTGGAAGCCGGCGGATTTTATGCAAACCTGTATAACAGCCAGTTTGAGAAGGCAGAGGCCA
TGTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(389-537)

ABC transporter transmembrane region (ABC_membrane)

(45-325)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

51.195

95.44

0.489

Multiple sequence alignment