Detailed information NTG1091778

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ACL7DE_RS04605
• Genome accession: NZ_CP178823
• Coordinates: 931354..932457 (-)
• Length: 367 a.a.
• NCBI ID: WP_023853086.1
• Uniprot ID: A0AAI9J0F0
• Organism: Bordetella pertussis strain YW10
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 926354..937457

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACL7DE_RS04580 (ACL7DE_04580)	-	926391..927341 (+)	951	WP_005013747.1	IS481-like element IS481 family transposase	-
ACL7DE_RS04585 (ACL7DE_04585)	-	927335..927820 (+)	486	Protein_903	phosphonate ABC transporter ATP-binding protein	-
ACL7DE_RS04590 (ACL7DE_04590)	phnE	927838..928707 (+)	870	WP_023998122.1	phosphonate ABC transporter, permease protein PhnE	-
ACL7DE_RS04595 (ACL7DE_04595)	phnE	928704..929525 (+)	822	WP_010931496.1	phosphonate ABC transporter, permease protein PhnE	-
ACL7DE_RS04600 (ACL7DE_04600)	-	929709..931307 (+)	1599	Protein_906	CYTH and CHAD domain-containing protein	-
ACL7DE_RS04605 (ACL7DE_04605)	pilA	931354..932457 (-)	1104	WP_023853086.1	signal recognition particle-docking protein FtsY	Machinery gene
ACL7DE_RS04610 (ACL7DE_04610)	rsmD	932533..933153 (+)	621	WP_003808577.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ACL7DE_RS04615 (ACL7DE_04615)	coaD	933174..933683 (+)	510	WP_003808574.1	pantetheine-phosphate adenylyltransferase	-
ACL7DE_RS04620 (ACL7DE_04620)	-	933738..933989 (+)	252	WP_003808570.1	YfhL family 4Fe-4S dicluster ferredoxin	-
ACL7DE_RS04625 (ACL7DE_04625)	-	934053..935186 (+)	1134	WP_010931494.1	benzoate/H(+) symporter BenE family transporter	-
ACL7DE_RS04630 (ACL7DE_04630)	-	935194..935580 (-)	387	WP_003808567.1	MOSC N-terminal beta barrel domain-containing protein	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 38499.02 Da
• Isoelectric Point: 6.5148

>NTDB_id=1091778 ACL7DE_RS04605 WP_023853086.1 931354..932457(-) (pilA) [Bordetella pertussis strain YW10]
MFSFFKKKSPPPAAPAQPAPPPEAVDAGSAAPAQPQPAEPQPEPQPQQPPEPQPPVAAAPEAPRKASWLSRLKQGLSRTG
QNIGGLFVGVKVDENLFEELESALIMADAGIEATEKLLAALRARVKKERIDDPAQVKTALRQLLADHLRPLERSFDLGRA
QPLVVMIAGVNGAGKTTSIGKLAHTFQRQGASVLLAAGDTFRAAAREQLVEWGSRNNVTVISQDGGDPAAVAFDSVNAGR
ARNVGVVMVDTAGRLPTQLHLMEELKKIRRVIGKAEASAPHEVLLVVDGNTGQNALAQIRAFDAAITLTGLVVTKLDGTA
KGGTLAAVAAGSQGVRPIPVYWIGVGEGLEDLQPFVADEFAAALLAD

Nucleotide

• Length: 1104 bp

>NTDB_id=1091778 ACL7DE_RS04605 WP_023853086.1 931354..932457(-) (pilA) [Bordetella pertussis strain YW10]
ATGTTCAGCTTCTTCAAGAAAAAATCCCCTCCGCCCGCCGCGCCGGCCCAGCCCGCGCCGCCGCCGGAGGCAGTGGACGC
AGGGTCAGCCGCACCTGCGCAGCCTCAACCCGCCGAGCCGCAGCCCGAGCCGCAGCCGCAACAACCGCCCGAGCCGCAGC
CACCGGTCGCGGCCGCGCCCGAGGCGCCCCGCAAGGCCTCGTGGCTGAGCCGGCTCAAACAGGGCCTGTCGCGCACCGGC
CAGAACATCGGCGGGCTGTTCGTCGGCGTGAAGGTCGACGAGAACCTGTTCGAGGAACTGGAGTCGGCGCTGATCATGGC
CGACGCGGGCATCGAGGCCACCGAGAAACTGCTGGCCGCGCTGCGCGCGCGCGTCAAGAAAGAGCGCATCGACGATCCGG
CGCAGGTCAAGACGGCGCTGCGCCAATTGCTGGCCGACCATCTGCGGCCGCTGGAGCGGTCCTTCGACCTGGGGCGGGCC
CAGCCCCTGGTGGTCATGATCGCCGGCGTCAACGGCGCGGGCAAGACGACCTCGATCGGCAAGCTGGCGCATACCTTCCA
GCGCCAGGGCGCCAGCGTGCTGCTGGCGGCCGGGGACACCTTCCGCGCGGCGGCGCGCGAGCAATTGGTCGAATGGGGCA
GCCGCAACAATGTGACCGTGATCTCGCAGGATGGCGGCGATCCGGCCGCGGTGGCGTTCGACTCGGTCAATGCCGGACGT
GCGCGCAACGTGGGCGTGGTGATGGTGGATACGGCCGGCCGCCTGCCCACGCAGCTGCACCTGATGGAAGAATTGAAGAA
GATCCGCCGCGTCATCGGCAAGGCCGAGGCCAGCGCGCCGCATGAAGTGCTGCTGGTGGTCGATGGCAACACCGGCCAGA
ACGCGCTGGCGCAAATCCGCGCCTTCGACGCCGCCATCACCCTCACCGGCCTGGTCGTCACCAAGCTGGACGGCACCGCC
AAGGGCGGCACGCTGGCGGCCGTGGCCGCCGGCAGCCAGGGCGTGCGGCCCATCCCGGTCTATTGGATCGGCGTGGGCGA
GGGGTTGGAGGACCTGCAGCCCTTCGTGGCCGACGAGTTCGCCGCCGCCCTGCTGGCCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (163-365)

• SRP54-type protein, helical bundle domain (SRP54_N) (83-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.913	94.005	0.507