Detailed information NTG0109168

Bioinformatically predicted

Overview

• Name: radA
• Type: Machinery gene
• Locus tag: ACGHP4_RS10595
• Genome accession: NZ_AP031413
• Coordinates: 2307743..2309119 (+)
• Length: 458 a.a.
• NCBI ID: WP_033144210.1
• Uniprot ID: -
• Organism: Blautia parvula strain f21
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2302743..2314119

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACGHP4_RS10575 (F210042A8_20870)	purD	2302828..2304102 (+)	1275	WP_103732513.1	phosphoribosylamine--glycine ligase	-
ACGHP4_RS10580 (F210042A8_20880)	-	2304242..2304610 (+)	369	WP_033144213.1	GntR family transcriptional regulator	-
ACGHP4_RS10585 (F210042A8_20890)	-	2304626..2307088 (+)	2463	WP_390555300.1	ATP-dependent Clp protease ATP-binding subunit	-
ACGHP4_RS10590 (F210042A8_20900)	-	2307211..2307624 (+)	414	WP_033144211.1	hypothetical protein	-
ACGHP4_RS10595 (F210042A8_20910)	radA	2307743..2309119 (+)	1377	WP_033144210.1	DNA repair protein RadA	Machinery gene

Sequence

Protein

• Length: 458 a.a.
• Molecular weight: 49512.01 Da
• Isoelectric Point: 7.5085

>NTDB_id=109168 ACGHP4_RS10595 WP_033144210.1 2307743..2309119(+) (radA) [Blautia parvula strain f21]
MAKAKKTVFFCQNCGYESAKWMGQCPGCREWNSFVEETVSQGAKKSSGQATAGSPGGRAGKPVKLSEIDIREDNRVKTGM
DELDRVLGGGVVQGSMVLVGGDPGIGKSTLLLQVCKLLSDLGHKILYISGEESLQQIKMRARRIGEFNENLRLLCETNLE
TISTTIENEKPEAVIIDSIQTMYNEEVSSAPGSVSQVRESTGILMKIAKGSGISVFIVGHVTKDGSVAGPRVLEHMVDTV
LYFEGDRHASYRILRSVKNRFGSTNEIGVFEMQERGLVEVKNPSQVMLNGRPTDASGTVVVCSLEGTRPILIEIQALVTK
TNFGLPRRTSVGIDYNRVNLLMAVLEKRAGLALGNCDAYVNLAGGMKLGEPAIDLGIVVAIISSYKNRTVDPDTLIFGEV
GLSGEVRGVSQAQQRVKEAEKMGFTTCIMPKANLEGLQGEFQIRLIGVGNLKDVMGYI

Nucleotide

• Length: 1377 bp

>NTDB_id=109168 ACGHP4_RS10595 WP_033144210.1 2307743..2309119(+) (radA) [Blautia parvula strain f21]
ATGGCAAAGGCTAAGAAAACCGTTTTTTTCTGCCAGAACTGCGGATATGAATCTGCGAAATGGATGGGGCAGTGCCCGGG
ATGCCGGGAGTGGAATTCCTTTGTGGAGGAGACTGTTTCACAGGGGGCGAAAAAAAGCTCCGGGCAGGCAACAGCAGGCA
GTCCGGGAGGACGGGCAGGCAAGCCGGTGAAGCTCTCCGAGATTGACATCCGTGAGGACAACCGGGTAAAGACCGGAATG
GATGAATTAGACCGGGTTCTGGGCGGCGGCGTGGTCCAGGGCTCCATGGTTCTGGTGGGCGGAGATCCGGGTATCGGAAA
ATCAACCCTTCTTCTGCAGGTGTGCAAGCTTCTTTCAGATCTGGGGCATAAGATTCTCTACATATCAGGGGAGGAATCCC
TGCAGCAGATTAAAATGCGGGCACGGCGTATCGGGGAATTTAATGAGAACCTGCGCCTTCTCTGTGAGACGAACCTGGAG
ACCATCAGTACGACCATAGAAAATGAGAAGCCTGAGGCAGTAATCATTGACTCTATCCAAACCATGTATAATGAGGAGGT
ATCATCCGCGCCGGGCAGTGTCTCACAGGTCCGGGAATCCACAGGCATACTTATGAAGATCGCAAAGGGCAGCGGTATCT
CCGTATTTATTGTAGGTCATGTGACGAAGGACGGAAGTGTTGCCGGTCCCCGAGTTCTGGAACACATGGTGGATACCGTG
CTCTATTTTGAAGGGGACAGGCATGCCTCTTACCGGATTTTGAGAAGTGTAAAGAACCGTTTCGGCTCCACCAATGAAAT
CGGTGTGTTTGAGATGCAGGAGCGCGGCCTGGTGGAGGTGAAAAACCCCTCCCAGGTTATGCTGAACGGGCGCCCCACAG
ATGCCTCCGGGACAGTAGTAGTGTGCTCTTTGGAGGGAACACGTCCAATCCTGATAGAAATCCAGGCGCTGGTGACAAAG
ACAAACTTTGGCCTTCCCAGAAGGACTTCCGTAGGCATAGACTATAACCGTGTCAACCTGCTGATGGCAGTCCTGGAGAA
GCGCGCAGGTCTGGCGCTTGGAAACTGCGATGCATACGTCAATCTGGCAGGCGGCATGAAACTGGGGGAACCGGCCATTG
ATCTGGGAATCGTGGTAGCCATCATATCCAGCTATAAGAACAGGACTGTGGATCCGGATACCCTGATCTTCGGTGAGGTG
GGCCTGTCCGGTGAAGTGCGGGGAGTCAGTCAGGCACAACAGAGGGTGAAGGAAGCGGAAAAAATGGGATTTACCACCTG
CATTATGCCAAAGGCAAATCTGGAAGGGCTGCAGGGAGAGTTTCAGATTCGTCTGATCGGAGTGGGGAATCTGAAAGATG
TGATGGGATATATATAA

Domains

Predicted by InterproScan.

• AAA domain (AAA_25) (72-225)

• Subunit ChlI of Mg-chelatase (ChlI) (349-433)

• Rubredoxin metal binding domain (Zn_ribbon_LapB) (10-36)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
radA	Bacillus subtilis subsp. subtilis str. 168	57.582	99.345	0.572
radA	Streptococcus mitis NCTC 12261	56.703	99.345	0.563
radA	Streptococcus mitis SK321	56.484	99.345	0.561
radA	Streptococcus pneumoniae Rx1	56.484	99.345	0.561
radA	Streptococcus pneumoniae D39	56.484	99.345	0.561
radA	Streptococcus pneumoniae R6	56.484	99.345	0.561
radA	Streptococcus pneumoniae TIGR4	56.484	99.345	0.561