Detailed information NTG1091454

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ACL7CM_RS04660
• Genome accession: NZ_CP178782
• Coordinates: 940856..941959 (-)
• Length: 367 a.a.
• NCBI ID: WP_023853086.1
• Uniprot ID: A0AAI9J0F0
• Organism: Bordetella pertussis strain YW55
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 935856..946959

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACL7CM_RS04635 (ACL7CM_04635)	-	935888..936838 (+)	951	WP_005013747.1	IS481-like element IS481 family transposase	-
ACL7CM_RS04640 (ACL7CM_04640)	-	936832..937317 (+)	486	Protein_914	phosphonate ABC transporter ATP-binding protein	-
ACL7CM_RS04645 (ACL7CM_04645)	phnE	937335..938204 (+)	870	WP_023998122.1	phosphonate ABC transporter, permease protein PhnE	-
ACL7CM_RS04650 (ACL7CM_04650)	phnE	938201..939022 (+)	822	WP_010931496.1	phosphonate ABC transporter, permease protein PhnE	-
ACL7CM_RS04655 (ACL7CM_04655)	-	939211..940809 (+)	1599	Protein_917	CYTH and CHAD domain-containing protein	-
ACL7CM_RS04660 (ACL7CM_04660)	pilA	940856..941959 (-)	1104	WP_023853086.1	signal recognition particle-docking protein FtsY	Machinery gene
ACL7CM_RS04665 (ACL7CM_04665)	rsmD	942035..942655 (+)	621	WP_003808577.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ACL7CM_RS04670 (ACL7CM_04670)	coaD	942676..943185 (+)	510	WP_003808574.1	pantetheine-phosphate adenylyltransferase	-
ACL7CM_RS04675 (ACL7CM_04675)	-	943240..943491 (+)	252	WP_003808570.1	YfhL family 4Fe-4S dicluster ferredoxin	-
ACL7CM_RS04680 (ACL7CM_04680)	-	943555..944688 (+)	1134	WP_010931494.1	benzoate/H(+) symporter BenE family transporter	-
ACL7CM_RS04685 (ACL7CM_04685)	-	944696..945082 (-)	387	WP_003808567.1	MOSC N-terminal beta barrel domain-containing protein	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 38499.02 Da
• Isoelectric Point: 6.5148

>NTDB_id=1091454 ACL7CM_RS04660 WP_023853086.1 940856..941959(-) (pilA) [Bordetella pertussis strain YW55]
MFSFFKKKSPPPAAPAQPAPPPEAVDAGSAAPAQPQPAEPQPEPQPQQPPEPQPPVAAAPEAPRKASWLSRLKQGLSRTG
QNIGGLFVGVKVDENLFEELESALIMADAGIEATEKLLAALRARVKKERIDDPAQVKTALRQLLADHLRPLERSFDLGRA
QPLVVMIAGVNGAGKTTSIGKLAHTFQRQGASVLLAAGDTFRAAAREQLVEWGSRNNVTVISQDGGDPAAVAFDSVNAGR
ARNVGVVMVDTAGRLPTQLHLMEELKKIRRVIGKAEASAPHEVLLVVDGNTGQNALAQIRAFDAAITLTGLVVTKLDGTA
KGGTLAAVAAGSQGVRPIPVYWIGVGEGLEDLQPFVADEFAAALLAD

Nucleotide

• Length: 1104 bp

>NTDB_id=1091454 ACL7CM_RS04660 WP_023853086.1 940856..941959(-) (pilA) [Bordetella pertussis strain YW55]
ATGTTCAGCTTCTTCAAGAAAAAATCCCCTCCGCCCGCCGCGCCGGCCCAGCCCGCGCCGCCGCCGGAGGCAGTGGACGC
AGGGTCAGCCGCACCTGCGCAGCCTCAACCCGCCGAGCCGCAGCCCGAGCCGCAGCCGCAACAACCGCCCGAGCCGCAGC
CACCGGTCGCGGCCGCGCCCGAGGCGCCCCGCAAGGCCTCGTGGCTGAGCCGGCTCAAACAGGGCCTGTCGCGCACCGGC
CAGAACATCGGCGGGCTGTTCGTCGGCGTGAAGGTCGACGAGAACCTGTTCGAGGAACTGGAGTCGGCGCTGATCATGGC
CGACGCGGGCATCGAGGCCACCGAGAAACTGCTGGCCGCGCTGCGCGCGCGCGTCAAGAAAGAGCGCATCGACGATCCGG
CGCAGGTCAAGACGGCGCTGCGCCAATTGCTGGCCGACCATCTGCGGCCGCTGGAGCGGTCCTTCGACCTGGGGCGGGCC
CAGCCCCTGGTGGTCATGATCGCCGGCGTCAACGGCGCGGGCAAGACGACCTCGATCGGCAAGCTGGCGCATACCTTCCA
GCGCCAGGGCGCCAGCGTGCTGCTGGCGGCCGGGGACACCTTCCGCGCGGCGGCGCGCGAGCAATTGGTCGAATGGGGCA
GCCGCAACAATGTGACCGTGATCTCGCAGGATGGCGGCGATCCGGCCGCGGTGGCGTTCGACTCGGTCAATGCCGGACGT
GCGCGCAACGTGGGCGTGGTGATGGTGGATACGGCCGGCCGCCTGCCCACGCAGCTGCACCTGATGGAAGAATTGAAGAA
GATCCGCCGCGTCATCGGCAAGGCCGAGGCCAGCGCGCCGCATGAAGTGCTGCTGGTGGTCGATGGCAACACCGGCCAGA
ACGCGCTGGCGCAAATCCGCGCCTTCGACGCCGCCATCACCCTCACCGGCCTGGTCGTCACCAAGCTGGACGGCACCGCC
AAGGGCGGCACGCTGGCGGCCGTGGCCGCCGGCAGCCAGGGCGTGCGGCCCATCCCGGTCTATTGGATCGGCGTGGGCGA
GGGGTTGGAGGACCTGCAGCCCTTCGTGGCCGACGAGTTCGCCGCCGCCCTGCTGGCCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (163-365)

• SRP54-type protein, helical bundle domain (SRP54_N) (83-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.913	94.005	0.507