Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   ACL6EO_RS07375 Genome accession   NZ_CP178718
Coordinates   1402050..1402649 (+) Length   199 a.a.
NCBI ID   WP_160216833.1    Uniprot ID   -
Organism   Bacillus velezensis strain SY1154     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1397050..1407649
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACL6EO_RS07345 (ACL6EO_07345) - 1397264..1397719 (+) 456 WP_014417614.1 flavodoxin -
  ACL6EO_RS07350 (ACL6EO_07350) dapD 1397801..1398511 (+) 711 WP_007409623.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  ACL6EO_RS07355 (ACL6EO_07355) - 1398582..1399706 (+) 1125 WP_063636606.1 N-acetyldiaminopimelate deacetylase -
  ACL6EO_RS07360 (ACL6EO_07360) - 1399767..1400012 (+) 246 WP_003154596.1 YkuS family protein -
  ACL6EO_RS07365 (ACL6EO_07365) - 1400046..1400852 (-) 807 WP_025649509.1 mechanosensitive ion channel family protein -
  ACL6EO_RS07370 (ACL6EO_07370) - 1401140..1401598 (+) 459 WP_017417682.1 TlpA disulfide reductase family protein -
  ACL6EO_RS07375 (ACL6EO_07375) rok 1402050..1402649 (+) 600 WP_160216833.1 transcriptional regulator Rok Regulator
  ACL6EO_RS07380 (ACL6EO_07380) - 1402670..1403662 (-) 993 WP_179156016.1 sporulation protein -
  ACL6EO_RS07385 (ACL6EO_07385) - 1403808..1404410 (+) 603 WP_123117784.1 molybdenum cofactor guanylyltransferase -
  ACL6EO_RS07390 (ACL6EO_07390) - 1404462..1405481 (+) 1020 WP_163093941.1 molybdopterin-synthase adenylyltransferase MoeB -
  ACL6EO_RS07395 (ACL6EO_07395) glp 1405499..1406791 (+) 1293 WP_276351080.1 gephyrin-like molybdotransferase Glp -
  ACL6EO_RS07400 (ACL6EO_07400) mobB 1406752..1407273 (+) 522 WP_163093945.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 199 a.a.        Molecular weight: 22653.70 Da        Isoelectric Point: 9.6909

>NTDB_id=1090916 ACL6EO_RS07375 WP_160216833.1 1402050..1402649(+) (rok) [Bacillus velezensis strain SY1154]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
TQPQSSQPQMQQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTF
MQSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 600 bp        

>NTDB_id=1090916 ACL6EO_RS07375 WP_160216833.1 1402050..1402649(+) (rok) [Bacillus velezensis strain SY1154]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACAGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGTGACTCTCTCCCGGTGCTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
ACACAGCCTCAATCCTCCCAGCCGCAGATGCAGCAGTCTATTACGTCTCTTCCCGCCGGTATTCCGGACGGTTCTACAAG
AAGAAGAAGAGGGACGGCGAGACCGGGATCAAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACGTTGAAACGCCACA
ATGCAGCGATCAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTT
ATGCAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCA
GGAAACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

85.641

97.99

0.839

Multiple sequence alignment