Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrC   Type   Regulator
Locus tag   ACL6EO_RS01920 Genome accession   NZ_CP178718
Coordinates   380152..380271 (+) Length   39 a.a.
NCBI ID   WP_103527149.1    Uniprot ID   -
Organism   Bacillus velezensis strain SY1154     
Function   antagonize RapC (predicted from homology)   
Competence regulation

Genomic Context

Location: 375152..385271
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACL6EO_RS01905 (ACL6EO_01905) - 376764..377447 (+) 684 WP_014416901.1 response regulator transcription factor -
  ACL6EO_RS01910 (ACL6EO_01910) - 377434..378861 (+) 1428 WP_100261600.1 sensor histidine kinase -
  ACL6EO_RS01915 (ACL6EO_01915) rapC 379020..380168 (+) 1149 WP_014304340.1 Rap family tetratricopeptide repeat protein Regulator
  ACL6EO_RS01920 (ACL6EO_01920) phrC 380152..380271 (+) 120 WP_103527149.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  ACL6EO_RS01925 (ACL6EO_01925) - 380421..380531 (-) 111 WP_369878517.1 YjcZ family sporulation protein -
  ACL6EO_RS01930 (ACL6EO_01930) - 380611..381975 (-) 1365 WP_110085395.1 aspartate kinase -
  ACL6EO_RS01935 (ACL6EO_01935) ceuB 382389..383342 (+) 954 WP_015239156.1 ABC transporter permease Machinery gene
  ACL6EO_RS01940 (ACL6EO_01940) - 383332..384279 (+) 948 WP_014416905.1 iron chelate uptake ABC transporter family permease subunit -
  ACL6EO_RS01945 (ACL6EO_01945) - 384273..385031 (+) 759 WP_012116804.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4243.97 Da        Isoelectric Point: 9.4191

>NTDB_id=1090896 ACL6EO_RS01920 WP_103527149.1 380152..380271(+) (phrC) [Bacillus velezensis strain SY1154]
MKLKSKWFVICLAAAAIFTVTGAGQTNQSEFHVAERGMT

Nucleotide


Download         Length: 120 bp        

>NTDB_id=1090896 ACL6EO_RS01920 WP_103527149.1 380152..380271(+) (phrC) [Bacillus velezensis strain SY1154]
ATGAAATTGAAATCTAAATGGTTTGTTATTTGTTTAGCAGCCGCCGCGATTTTTACAGTGACAGGTGCAGGCCAGACAAA
TCAGTCTGAATTCCATGTAGCTGAAAGAGGAATGACGTGA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrC Bacillus subtilis subsp. subtilis str. 168

67.5

100

0.692

Multiple sequence alignment