Detailed information NTG1090883

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: ACL6ER_RS20550
• Genome accession: NZ_CP178717
• Coordinates: 4080241..4081353 (+)
• Length: 370 a.a.
• NCBI ID: WP_019257226.1
• Uniprot ID: -
• Organism: Bacillus inaquosorum strain SY1167
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 4075241..4086353

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACL6ER_RS20525 (ACL6ER_20525)	rnpA	4075949..4076299 (-)	351	WP_003236647.1	ribonuclease P protein component	-
ACL6ER_RS20530 (ACL6ER_20530)	rpmH	4076452..4076586 (-)	135	WP_003178075.1	50S ribosomal protein L34	-
ACL6ER_RS20535 (ACL6ER_20535)	dnaA	4077213..4078553 (+)	1341	WP_003236652.1	chromosomal replication initiator protein DnaA	-
ACL6ER_RS20540 (ACL6ER_20540)	dnaN	4078742..4079878 (+)	1137	WP_268278111.1	DNA polymerase III subunit beta	-
ACL6ER_RS20545 (ACL6ER_20545)	rlbA	4080010..4080225 (+)	216	WP_003236655.1	ribosome maturation protein RlbA	-
ACL6ER_RS20550 (ACL6ER_20550)	recF	4080241..4081353 (+)	1113	WP_019257226.1	DNA replication/repair protein RecF	Machinery gene
ACL6ER_RS20555 (ACL6ER_20555)	remB	4081371..4081616 (+)	246	WP_003219266.1	extracellular matrix regulator RemB	-
ACL6ER_RS20560 (ACL6ER_20560)	gyrB	4081670..4083586 (+)	1917	WP_268279294.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
ACL6ER_RS20565 (ACL6ER_20565)	gyrA	4083796..4086261 (+)	2466	WP_019257227.1	DNA topoisomerase (ATP-hydrolyzing) subunit A	-

Sequence

Protein

• Length: 370 a.a.
• Molecular weight: 42360.36 Da
• Isoelectric Point: 7.0881

>NTDB_id=1090883 ACL6ER_RS20550 WP_019257226.1 4080241..4081353(+) (recF) [Bacillus inaquosorum strain SY1167]
MYIQNLELTSYRNYDHAELQFENKVNVIIGENAQGKTNLMEAIYVLSMAKSHRTSNDKELIRWDKDYAKIEGRVMKQNGA
IPMQLVISKKGKKGKVNHIEQQKLSQYVGALNTIMFAPEDLNLVKGSPQVRRRFLDMEIGQVSPVYLYDLSLYQKILSQR
NHFLKQLQTRKQTDRTMLDVLTDQLVEVAAKVVVKRLQFTAQLEKWAQPIHAGISRGLEELTLKYHTALEVSDPEDLSKI
GDSYQEAFSKLREKEIERGVTLSGPHRDDVLFYVNGRDVQTYGSQGQQRTTALSLKLAEIDLIHEEIGEYPILLLDDVLS
ELDDYRQSHLLHTIQGRVQTFVTTTSVDGIDHETLRQAGMFRVQNGALVK

Nucleotide

• Length: 1113 bp

>NTDB_id=1090883 ACL6ER_RS20550 WP_019257226.1 4080241..4081353(+) (recF) [Bacillus inaquosorum strain SY1167]
TTGTATATCCAGAACTTAGAACTGACATCTTACCGCAACTACGACCATGCCGAACTGCAATTTGAAAATAAAGTAAATGT
GATCATCGGAGAAAACGCCCAGGGGAAAACAAACCTCATGGAGGCGATCTATGTCTTGTCCATGGCGAAATCGCACCGGA
CATCAAATGACAAAGAACTTATACGGTGGGACAAAGACTATGCTAAAATAGAGGGAAGAGTGATGAAGCAAAACGGGGCG
ATCCCGATGCAGCTCGTCATCTCCAAAAAGGGTAAAAAGGGCAAGGTCAATCATATTGAACAGCAAAAGCTCAGCCAGTA
TGTCGGGGCCCTCAACACCATCATGTTTGCGCCGGAAGATTTAAATCTTGTAAAGGGAAGCCCTCAAGTGAGAAGGCGGT
TTCTTGACATGGAAATCGGACAGGTTTCTCCTGTTTACCTGTATGACCTTTCTCTTTACCAGAAAATCCTTTCTCAGCGA
AATCATTTTTTGAAGCAGCTGCAAACAAGAAAACAAACTGACAGAACGATGCTCGATGTTTTGACCGATCAGCTTGTGGA
AGTTGCGGCAAAAGTCGTCGTAAAACGCCTGCAGTTTACAGCACAGCTCGAAAAATGGGCGCAGCCAATTCATGCGGGCA
TCTCAAGAGGGTTAGAAGAGCTGACCCTAAAGTACCATACGGCTCTTGAGGTATCAGATCCTGAAGACTTGTCGAAAATA
GGAGATAGCTATCAAGAAGCGTTTTCTAAATTAAGAGAAAAAGAAATCGAGCGCGGTGTTACGCTGTCAGGGCCTCATCG
TGACGATGTTCTTTTCTATGTGAACGGACGCGATGTGCAGACGTATGGTTCTCAAGGACAGCAGCGAACGACGGCATTGT
CCCTTAAGCTGGCGGAAATTGATCTGATCCATGAAGAAATCGGAGAATATCCCATTTTACTATTGGATGATGTACTGAGT
GAGCTGGATGATTATCGCCAGTCACACTTGCTTCATACGATCCAAGGCCGTGTACAAACGTTTGTCACAACGACAAGCGT
TGATGGCATTGATCACGAAACCTTACGTCAAGCAGGAATGTTCCGTGTGCAAAACGGTGCGTTAGTGAAGTGA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-350)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	99.189	100	0.992