Detailed information NTG1090879

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: ACL6ER_RS18650
• Genome accession: NZ_CP178717
• Coordinates: 3709603..3710748 (+)
• Length: 381 a.a.
• NCBI ID: WP_225514327.1
• Uniprot ID: -
• Organism: Bacillus inaquosorum strain SY1167
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3704603..3715748

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACL6ER_RS18630 (ACL6ER_18630)	-	3704611..3705891 (+)	1281	WP_268331737.1	M16 family metallopeptidase	-
ACL6ER_RS18635 (ACL6ER_18635)	-	3705888..3706589 (+)	702	WP_268331736.1	bacteriocin biosynthesis protein AlbG	-
ACL6ER_RS18640 (ACL6ER_18640)	-	3706596..3707972 (-)	1377	WP_268411115.1	YncE family protein	-
ACL6ER_RS18645 (ACL6ER_18645)	-	3708012..3709373 (-)	1362	WP_268279777.1	YncE family protein	-
ACL6ER_RS18650 (ACL6ER_18650)	rapF	3709603..3710748 (+)	1146	WP_225514327.1	tetratricopeptide repeat protein	Regulator
ACL6ER_RS18655 (ACL6ER_18655)	-	3710732..3710851 (+)	120	WP_014665774.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
ACL6ER_RS18660 (ACL6ER_18660)	-	3710954..3711427 (+)	474	WP_268278411.1	YbaK/EbsC family protein	-
ACL6ER_RS18665 (ACL6ER_18665)	speB	3711460..3712332 (-)	873	WP_119914420.1	agmatinase	-
ACL6ER_RS18670 (ACL6ER_18670)	speE	3712393..3713223 (-)	831	WP_003227543.1	spermidine synthase	-
ACL6ER_RS18675 (ACL6ER_18675)	-	3713425..3715500 (+)	2076	WP_268279778.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45632.20 Da
• Isoelectric Point: 4.7648

>NTDB_id=1090879 ACL6ER_RS18650 WP_225514327.1 3709603..3710748(+) (rapF) [Bacillus inaquosorum strain SY1167]
MTGVISSSSVGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELERREYVLAIQFFKKAESKLIFVKDKIDKAEFFFKMSEVYYYMKQTYVS
MDYARQAFEIYSEQTTYDIRMIQCQSLFGANFLDLKQYEKAIAHFQKAYTLAEAEQQPQLMGRTLYNIALCKQNQNSFES
AIEYVKKSIQVFEGSKMLPSLPQAFFLITQIYFKLGKMDNACEYHIKGKEYSAEAGDTVYLTEFEFLESLYLSGPDEERI
EKCFVFLESKMMYADIEDFALDVAKYYHQQENYKKASNYFLKVEEARQHIQGGVNLYEMEV

Nucleotide

• Length: 1146 bp

>NTDB_id=1090879 ACL6ER_RS18650 WP_225514327.1 3709603..3710748(+) (rapF) [Bacillus inaquosorum strain SY1167]
GTGACAGGTGTCATTTCTTCTTCTTCCGTCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
TGATGCAGAATATTTGCGAAGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAATTCCGGCACAACCTGATGCTTGAGTACCTTGAACCGCTAGAGAAAATGCGGATCGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGGCTGCTTGAGTACTACTTTAATTTCTTCAG
AGGCATGTATGAACTGGAACGCCGTGAATATGTATTAGCCATTCAATTTTTTAAAAAAGCAGAGAGCAAACTGATTTTTG
TAAAAGACAAAATTGATAAAGCTGAATTCTTTTTCAAAATGTCAGAAGTCTATTACTATATGAAACAAACTTATGTCTCC
ATGGACTATGCACGTCAAGCATTCGAAATATACAGTGAACAGACTACATATGATATTAGAATGATTCAATGCCAGTCCTT
ATTCGGAGCTAACTTTTTGGATTTAAAACAATATGAGAAAGCAATTGCCCATTTTCAAAAAGCTTACACACTTGCTGAAG
CAGAGCAGCAGCCGCAATTAATGGGAAGAACGCTTTATAACATAGCGCTCTGCAAGCAAAATCAAAACAGTTTTGAATCA
GCGATTGAGTATGTAAAAAAATCTATTCAAGTATTTGAAGGATCTAAAATGCTCCCTTCTCTGCCACAAGCCTTTTTCCT
AATTACACAAATTTATTTTAAATTAGGTAAGATGGATAACGCTTGTGAATATCATATAAAAGGAAAAGAATATTCAGCAG
AAGCGGGAGACACTGTGTACTTAACGGAGTTTGAATTTTTGGAATCTTTATACTTGTCTGGACCAGATGAGGAACGGATA
GAAAAATGTTTTGTATTTCTTGAAAGTAAAATGATGTATGCTGATATTGAAGACTTCGCACTTGATGTTGCTAAATATTA
TCATCAGCAGGAAAATTACAAGAAAGCATCTAATTACTTTTTAAAGGTTGAAGAGGCAAGACAGCACATTCAAGGGGGGG
TGAATTTATATGAAATGGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (189-253)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	80.315	100	0.803
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572