Detailed information    

insolico Bioinformatically predicted

Overview

Name   comC   Type   Machinery gene
Locus tag   ACL6ER_RS13660 Genome accession   NZ_CP178717
Coordinates   2723243..2723989 (-) Length   248 a.a.
NCBI ID   WP_225514086.1    Uniprot ID   -
Organism   Bacillus inaquosorum strain SY1167     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2718243..2728989
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACL6ER_RS13635 (ACL6ER_13635) mreC 2718650..2719522 (-) 873 WP_003237571.1 rod shape-determining protein MreC -
  ACL6ER_RS13640 (ACL6ER_13640) mreB 2719553..2720566 (-) 1014 WP_003237574.1 cell shape-determining protein MreB -
  ACL6ER_RS13645 (ACL6ER_13645) radC 2720658..2721353 (-) 696 WP_003237576.1 RadC family protein -
  ACL6ER_RS13650 (ACL6ER_13650) - 2721390..2721959 (-) 570 WP_003237578.1 Maf family nucleotide pyrophosphatase -
  ACL6ER_RS13655 (ACL6ER_13655) - 2722111..2723109 (-) 999 WP_060399204.1 SPOR domain-containing protein -
  ACL6ER_RS13660 (ACL6ER_13660) comC 2723243..2723989 (-) 747 WP_225514086.1 prepilin peptidase Machinery gene
  ACL6ER_RS13665 (ACL6ER_13665) - 2724131..2725423 (-) 1293 WP_268285377.1 bifunctional folylpolyglutamate synthase/dihydrofolate synthase -
  ACL6ER_RS13670 (ACL6ER_13670) valS 2725483..2728125 (-) 2643 WP_268332308.1 valine--tRNA ligase -
  ACL6ER_RS13675 (ACL6ER_13675) - 2728573..2728764 (+) 192 WP_003222590.1 hypothetical protein -

Sequence

Protein


Download         Length: 248 a.a.        Molecular weight: 26400.00 Da        Isoelectric Point: 9.6313

>NTDB_id=1090862 ACL6ER_RS13660 WP_225514086.1 2723243..2723989(-) (comC) [Bacillus inaquosorum strain SY1167]
MLPILFILGLILGSFYYTAGCRIPLHISIITPRSACSFCRRTLTPAELIPILSFLFQIGKCKSCGHRISFMYPVAELVTA
CLFAAAGIRFGPSPELFPALVFISLLIIVAVTDIHFMLIPNRILIFFVPVLAAARLISPLDSWYAGLLGAAAGFLFLALI
AAITHGGIGGGDIKLFAVIGFVLGVKMLAAAFFFSVLIGALYGAAAVLTGRHAKRQPLPFAPAIAAGSILAYLYGDSIIS
FYIKMALG

Nucleotide


Download         Length: 747 bp        

>NTDB_id=1090862 ACL6ER_RS13660 WP_225514086.1 2723243..2723989(-) (comC) [Bacillus inaquosorum strain SY1167]
ATGCTTCCCATTCTCTTTATCCTCGGGCTTATCCTTGGTTCATTTTATTATACGGCCGGGTGCCGTATCCCCTTACATAT
ATCCATTATCACGCCCCGTTCGGCATGCTCGTTTTGCCGGCGGACATTAACCCCGGCAGAATTAATCCCCATCCTGTCAT
TCCTTTTCCAAATAGGCAAATGTAAAAGCTGCGGGCACAGAATTTCTTTTATGTATCCTGTGGCAGAGCTTGTGACAGCG
TGTTTATTTGCGGCAGCAGGAATACGCTTTGGCCCGTCTCCGGAACTGTTTCCCGCTCTCGTGTTTATCTCTCTTCTCAT
CATCGTTGCAGTGACAGATATTCATTTTATGCTGATACCAAATCGGATATTAATTTTCTTTGTTCCCGTTCTGGCCGCTG
CAAGATTGATTTCTCCACTTGATTCCTGGTATGCCGGCCTGTTAGGTGCGGCCGCCGGATTTCTATTCCTGGCCTTAATT
GCCGCAATCACCCATGGGGGAATAGGGGGAGGAGATATTAAATTATTTGCGGTGATTGGCTTTGTACTTGGTGTGAAAAT
GCTGGCAGCTGCCTTTTTCTTTTCTGTTTTGATAGGTGCATTGTATGGAGCGGCAGCTGTCCTGACTGGAAGACACGCCA
AAAGACAGCCGCTTCCCTTTGCCCCCGCAATTGCTGCAGGGAGCATTTTAGCTTATTTATACGGTGACTCTATCATATCT
TTTTATATCAAAATGGCATTGGGCTGA

Domains

Predicted by InterproScan.

Bacterial Peptidase A24 N-terminal domain (A24_N_bact)

(7-90)

Type IV leader peptidase family (Peptidase_A24)

(100-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comC Bacillus subtilis subsp. subtilis str. 168

93.548

100

0.935

Multiple sequence alignment