Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   ACL6ER_RS06785 Genome accession   NZ_CP178717
Coordinates   1364028..1364612 (+) Length   194 a.a.
NCBI ID   WP_003238902.1    Uniprot ID   A0A9Q4HW25
Organism   Bacillus inaquosorum strain SY1167     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1359028..1369612
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACL6ER_RS06755 (ACL6ER_06755) dapD 1359211..1359921 (+) 711 WP_003238912.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  ACL6ER_RS06760 (ACL6ER_06760) - 1359991..1361115 (+) 1125 WP_268331582.1 N-acetyldiaminopimelate deacetylase -
  ACL6ER_RS06765 (ACL6ER_06765) - 1361176..1361421 (+) 246 WP_003238909.1 YkuS family protein -
  ACL6ER_RS06770 (ACL6ER_06770) mscT 1361459..1362262 (-) 804 WP_268331580.1 small-conductance mechanosensitive channel protein MscT -
  ACL6ER_RS06775 (ACL6ER_06775) ahpA 1362506..1363048 (+) 543 WP_003238905.1 biofilm-specific peroxidase AhpA -
  ACL6ER_RS06780 (ACL6ER_06780) - 1363118..1363576 (+) 459 WP_003238903.1 TlpA disulfide reductase family protein -
  ACL6ER_RS06785 (ACL6ER_06785) rok 1364028..1364612 (+) 585 WP_003238902.1 transcriptional regulator Rok Regulator
  ACL6ER_RS06790 (ACL6ER_06790) - 1364654..1365619 (-) 966 WP_268331578.1 sporulation protein -
  ACL6ER_RS06795 (ACL6ER_06795) - 1365755..1366354 (+) 600 WP_268276732.1 molybdenum cofactor guanylyltransferase -
  ACL6ER_RS06800 (ACL6ER_06800) - 1366405..1367424 (+) 1020 WP_268331570.1 molybdopterin-synthase adenylyltransferase MoeB -
  ACL6ER_RS06805 (ACL6ER_06805) glp 1367442..1368734 (+) 1293 WP_268331568.1 gephyrin-like molybdotransferase Glp -
  ACL6ER_RS06810 (ACL6ER_06810) mobB 1368695..1369216 (+) 522 WP_088110999.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 194 a.a.        Molecular weight: 22145.10 Da        Isoelectric Point: 9.7169

>NTDB_id=1090836 ACL6ER_RS06785 WP_003238902.1 1364028..1364612(+) (rok) [Bacillus inaquosorum strain SY1167]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEVKKDFRSERKTDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESAESANE

Nucleotide


Download         Length: 585 bp        

>NTDB_id=1090836 ACL6ER_RS06785 WP_003238902.1 1364028..1364612(+) (rok) [Bacillus inaquosorum strain SY1167]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTACGATTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATCGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAGTCAAAAAGGATTTCC
GTTCTGAACGAAAAACTGACTCTCTGCCGGTTCTTGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAACAGCAGTCTGTACAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCTGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCGAAAGCAGCTAAGCTGCGTGAAGCTGCCATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCCGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAACCGTATCGCGGCCAGTACATTTTAGAAGGTGAAATCGAATCAGCTGA
ATCTGCAGAATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

98.413

97.423

0.959

Multiple sequence alignment