Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   ACL6ER_RS05350 Genome accession   NZ_CP178717
Coordinates   1107680..1108831 (+) Length   383 a.a.
NCBI ID   WP_268331689.1    Uniprot ID   -
Organism   Bacillus inaquosorum strain SY1167     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1102680..1113831
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACL6ER_RS05320 (ACL6ER_05320) - 1103341..1104558 (+) 1218 WP_268290307.1 MFS transporter -
  ACL6ER_RS05325 (ACL6ER_05325) - 1104733..1105311 (+) 579 WP_003239283.1 GNAT family N-acetyltransferase -
  ACL6ER_RS05330 (ACL6ER_05330) spx 1105492..1105887 (+) 396 WP_003239281.1 transcriptional regulator Spx -
  ACL6ER_RS05335 (ACL6ER_05335) - 1105930..1106586 (-) 657 WP_019258060.1 TerC family protein -
  ACL6ER_RS05340 (ACL6ER_05340) - 1106771..1106896 (+) 126 WP_119913679.1 hypothetical protein -
  ACL6ER_RS05345 (ACL6ER_05345) mecA 1106863..1107519 (+) 657 WP_003239278.1 adaptor protein MecA Regulator
  ACL6ER_RS05350 (ACL6ER_05350) coiA 1107680..1108831 (+) 1152 WP_268331689.1 competence protein CoiA family protein Machinery gene
  ACL6ER_RS05355 (ACL6ER_05355) pepF 1109061..1110890 (+) 1830 WP_168767880.1 oligoendopeptidase F -
  ACL6ER_RS05360 (ACL6ER_05360) - 1110929..1111096 (-) 168 WP_032732134.1 hypothetical protein -
  ACL6ER_RS05365 (ACL6ER_05365) spxH 1111410..1112309 (-) 900 WP_119913682.1 protease adaptor protein SpxH -
  ACL6ER_RS05370 (ACL6ER_05370) - 1112306..1112704 (-) 399 WP_003239269.1 thiol management oxidoreductase component -
  ACL6ER_RS05375 (ACL6ER_05375) - 1112960..1113697 (-) 738 WP_327809606.1 lytic transglycosylase domain-containing protein -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44970.28 Da        Isoelectric Point: 9.9802

>NTDB_id=1090831 ACL6ER_RS05350 WP_268331689.1 1107680..1108831(+) (coiA) [Bacillus inaquosorum strain SY1167]
MFSAVTKDGQMVHLLGAQRSQKLKQRRFFCPACGGELDVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLK
TQQASPLLEPYIKKINQRPDIMAKFKRHMLAVEYQCANLAPDVFQKRTEGFKQEGIIPQWIVGNSRLKRTAPSFYQLSAF
HWQFINASPYRELICYCPETRSFRRLSHIIPFYTNHSYSSVQMIPIHRAGAKDLFFTEPMLSFQYSGWTNAIHRFRHKPH
RFISKETNRLRLLFYEKRQTPLSFLPTEVFVPVIKGAVFHSPVFVWQGFLYLFITDLGYKGAPIRFSAVLQQCKLHIYKK
NISLRYECSEDCLSEAVKQYIDFLCKKGFLRETQKEIYVLNQPKEGIRSIQDLMERDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=1090831 ACL6ER_RS05350 WP_268331689.1 1107680..1108831(+) (coiA) [Bacillus inaquosorum strain SY1167]
GTGTTTAGTGCTGTGACTAAAGACGGCCAAATGGTTCACCTTCTAGGCGCTCAGCGAAGCCAGAAATTAAAGCAGAGACG
ATTCTTCTGTCCGGCGTGCGGGGGAGAGCTTGATGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTCGCCCATAAACAGA
ACAAGTCCTGCTCGATAGACATAGAACCGGAAAGCGCCTATCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACGCAACAGGCTTCTCCGCTATTAGAACCGTATATCAAGAAAATCAATCAAAGACCCGACATCATGGCAAAGTTCAAGAG
ACACATGCTTGCTGTTGAGTATCAATGTGCCAATCTTGCTCCCGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATCCCGCAGTGGATTGTGGGAAACAGCCGCTTAAAACGAACTGCTCCATCCTTTTATCAGCTTTCTGCTTTC
CATTGGCAGTTTATCAATGCGAGCCCATACAGGGAACTGATCTGTTATTGCCCGGAAACGCGTTCTTTCCGCCGGCTCAG
CCATATCATCCCGTTTTACACAAACCATTCTTATTCCTCCGTTCAAATGATCCCTATCCATCGGGCAGGTGCAAAAGATC
TTTTTTTCACTGAACCGATGCTCTCATTTCAATACTCCGGCTGGACAAATGCGATTCACCGTTTTCGCCATAAACCCCAC
CGGTTCATCTCCAAGGAAACAAATCGCCTCAGGCTGCTGTTTTATGAAAAGCGGCAGACGCCCCTTTCTTTTCTTCCGAC
TGAAGTGTTTGTTCCTGTTATAAAAGGGGCTGTTTTTCATAGTCCGGTTTTTGTGTGGCAGGGGTTTCTATATCTGTTTA
TTACGGATCTTGGATATAAAGGCGCGCCAATTCGCTTTTCCGCCGTTTTACAGCAGTGCAAACTGCACATTTATAAAAAG
AACATTTCGCTCAGATACGAATGCAGCGAAGATTGTCTTTCAGAAGCGGTGAAACAGTACATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAATATATGTGCTGAATCAGCCTAAAGAGGGTATACGCTCAATACAGGATCTCA
TGGAAAGAGACCGCAGCTGTTTTATAGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

87.399

97.389

0.851


Multiple sequence alignment