Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   ACL6ER_RS05235 Genome accession   NZ_CP178717
Coordinates   1085400..1085591 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus inaquosorum strain SY1167     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1080400..1090591
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACL6ER_RS05205 (ACL6ER_05205) argF 1081260..1082220 (+) 961 Protein_1001 ornithine carbamoyltransferase -
  ACL6ER_RS05210 (ACL6ER_05210) - 1082306..1082485 (+) 180 WP_003239319.1 YjzC family protein -
  ACL6ER_RS05215 (ACL6ER_05215) - 1082531..1082716 (-) 186 WP_003224551.1 YjzD family protein -
  ACL6ER_RS05220 (ACL6ER_05220) - 1082968..1083702 (+) 735 WP_003239317.1 hypothetical protein -
  ACL6ER_RS05225 (ACL6ER_05225) - 1083784..1084341 (+) 558 WP_268328477.1 hypothetical protein -
  ACL6ER_RS05230 (ACL6ER_05230) med 1084432..1085385 (+) 954 WP_019258048.1 transcriptional regulator Med Regulator
  ACL6ER_RS05235 (ACL6ER_05235) comZ 1085400..1085591 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  ACL6ER_RS05240 (ACL6ER_05240) - 1085621..1085848 (-) 228 WP_080010764.1 hypothetical protein -
  ACL6ER_RS05245 (ACL6ER_05245) fabH 1086012..1086950 (+) 939 WP_003239309.1 beta-ketoacyl-ACP synthase III -
  ACL6ER_RS05250 (ACL6ER_05250) fabF 1086973..1088214 (+) 1242 WP_268281263.1 beta-ketoacyl-ACP synthase II -
  ACL6ER_RS05255 (ACL6ER_05255) - 1088291..1089076 (+) 786 WP_268281264.1 DUF2268 domain-containing protein -
  ACL6ER_RS05260 (ACL6ER_05260) appD 1089265..1090251 (+) 987 WP_003239306.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=1090827 ACL6ER_RS05235 WP_003224559.1 1085400..1085591(+) (comZ) [Bacillus inaquosorum strain SY1167]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=1090827 ACL6ER_RS05235 WP_003224559.1 1085400..1085591(+) (comZ) [Bacillus inaquosorum strain SY1167]
ATGCAGCACGAAAAATCACTGGAGTTCTTGCAAATTGCCATGAAATATCTGCCTGAAGCGAAAGAACAGCTTGAAAAATC
AGGCATTGAGCTGTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGATGCGAAATCTGAAACCGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment