Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | ACL6EQ_RS20675 | Genome accession | NZ_CP178716 |
| Coordinates | 4002033..4002323 (-) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis strain SY1483 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3997033..4007323
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACL6EQ_RS20635 (ACL6EQ_20635) | darA | 3997056..3997385 (+) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
| ACL6EQ_RS20640 (ACL6EQ_20640) | yaaR | 3997398..3997838 (+) | 441 | WP_009966249.1 | YaaR family protein | - |
| ACL6EQ_RS20645 (ACL6EQ_20645) | holB | 3997850..3998839 (+) | 990 | WP_413359565.1 | DNA polymerase III subunit delta' | - |
| ACL6EQ_RS20650 (ACL6EQ_20650) | ricT | 3998842..3999669 (+) | 828 | WP_003226767.1 | competence/sporulation regulator complex protein RicT | - |
| ACL6EQ_RS20655 (ACL6EQ_20655) | yabA | 3999684..4000043 (+) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| ACL6EQ_RS20660 (ACL6EQ_20660) | trmNF | 4000102..4000845 (+) | 744 | WP_003244526.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| ACL6EQ_RS20665 (ACL6EQ_20665) | yazA | 4000832..4001131 (+) | 300 | WP_153255572.1 | GIY-YIG nuclease family protein | - |
| ACL6EQ_RS20670 (ACL6EQ_20670) | rsmI | 4001106..4001984 (+) | 879 | WP_019712967.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| ACL6EQ_RS20675 (ACL6EQ_20675) | abrB | 4002033..4002323 (-) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| ACL6EQ_RS20680 (ACL6EQ_20680) | metG | 4002818..4004812 (+) | 1995 | WP_129137410.1 | methionine--tRNA ligase | - |
| ACL6EQ_RS20685 (ACL6EQ_20685) | dayD | 4004891..4005658 (+) | 768 | WP_014478595.1 | TatD family hydrolase | - |
| ACL6EQ_RS20690 (ACL6EQ_20690) | yabE | 4005814..4007127 (+) | 1314 | WP_015715099.1 | ubiquitin-like domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=1090808 ACL6EQ_RS20675 WP_003226760.1 4002033..4002323(-) (abrB) [Bacillus subtilis strain SY1483]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=1090808 ACL6EQ_RS20675 WP_003226760.1 4002033..4002323(-) (abrB) [Bacillus subtilis strain SY1483]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |