Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   ACL6EQ_RS06755 Genome accession   NZ_CP178716
Coordinates   1303757..1304332 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis strain SY1483     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1298757..1309332
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACL6EQ_RS06725 (ACL6EQ_06725) dapD 1298945..1299655 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  ACL6EQ_RS06730 (ACL6EQ_06730) dapI 1299725..1300849 (+) 1125 WP_305090476.1 N-acetyldiaminopimelate deacetylase -
  ACL6EQ_RS06735 (ACL6EQ_06735) ykuS 1300911..1301156 (+) 246 WP_003232382.1 YkuS family protein -
  ACL6EQ_RS06740 (ACL6EQ_06740) mscT 1301193..1301996 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  ACL6EQ_RS06745 (ACL6EQ_06745) ahpA 1302233..1302775 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  ACL6EQ_RS06750 (ACL6EQ_06750) ykuV 1302845..1303303 (+) 459 WP_305090475.1 thiol-disulfide oxidoreductase YkuV -
  ACL6EQ_RS06755 (ACL6EQ_06755) rok 1303757..1304332 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  ACL6EQ_RS06760 (ACL6EQ_06760) cse15 1304373..1305338 (-) 966 WP_024571970.1 spore protein Cse15 -
  ACL6EQ_RS06765 (ACL6EQ_06765) mobA 1305475..1306074 (+) 600 WP_014479670.1 molybdenum cofactor guanylyltransferase -
  ACL6EQ_RS06770 (ACL6EQ_06770) moeB 1306125..1307144 (+) 1020 WP_129137624.1 molybdopterin-synthase adenylyltransferase MoeB -
  ACL6EQ_RS06775 (ACL6EQ_06775) glp 1307162..1308454 (+) 1293 WP_129137625.1 gephyrin-like molybdotransferase Glp -
  ACL6EQ_RS06780 (ACL6EQ_06780) mobB 1308415..1308936 (+) 522 WP_124059811.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=1090758 ACL6EQ_RS06755 WP_003232378.1 1303757..1304332(+) (rok) [Bacillus subtilis strain SY1483]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=1090758 ACL6EQ_RS06755 WP_003232378.1 1303757..1304332(+) (rok) [Bacillus subtilis strain SY1483]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCTGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment