Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   ACL6EQ_RS06640 Genome accession   NZ_CP178716
Coordinates   1284569..1285033 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain SY1483     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1279569..1290033
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACL6EQ_RS06620 (ACL6EQ_06620) kinA 1280036..1281856 (+) 1821 WP_080529263.1 sporulation histidine kinase KinA -
  ACL6EQ_RS06625 (ACL6EQ_06625) dapX 1281866..1283047 (-) 1182 WP_014476653.1 aminotransferase A -
  ACL6EQ_RS06630 (ACL6EQ_06630) - 1283249..1283410 (-) 162 WP_003245246.1 hypothetical protein -
  ACL6EQ_RS06635 (ACL6EQ_06635) cheV 1283614..1284525 (+) 912 WP_305090477.1 chemotaxis protein CheV -
  ACL6EQ_RS06640 (ACL6EQ_06640) kre 1284569..1285033 (-) 465 WP_003232406.1 YkyB family protein Regulator
  ACL6EQ_RS06645 (ACL6EQ_06645) ykuC 1285159..1286451 (-) 1293 WP_014479656.1 MFS transporter -
  ACL6EQ_RS06650 (ACL6EQ_06650) ltdD 1286527..1287021 (-) 495 WP_305090601.1 L,D-transpeptidase family protein -
  ACL6EQ_RS06655 (ACL6EQ_06655) ppeE 1287078..1287938 (-) 861 WP_003232400.1 metallophosphoesterase -
  ACL6EQ_RS06660 (ACL6EQ_06660) fadH 1288081..1288845 (+) 765 WP_015383534.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=1090757 ACL6EQ_RS06640 WP_003232406.1 1284569..1285033(-) (kre) [Bacillus subtilis strain SY1483]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=1090757 ACL6EQ_RS06640 WP_003232406.1 1284569..1285033(-) (kre) [Bacillus subtilis strain SY1483]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGAATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment