Detailed information    

insolico Bioinformatically predicted

Overview


Name   med   Type   Regulator
Locus tag   ACL6EQ_RS05145 Genome accession   NZ_CP178716
Coordinates   1010622..1011575 (+) Length   317 a.a.
NCBI ID   WP_014476425.1    Uniprot ID   A0A0K6M9I2
Organism   Bacillus subtilis strain SY1483     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 1005622..1016575
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACL6EQ_RS05120 (ACL6EQ_05120) argF 1007451..1008410 (+) 960 WP_413360397.1 ornithine carbamoyltransferase -
  ACL6EQ_RS05125 (ACL6EQ_05125) yjzC 1008496..1008675 (+) 180 WP_003245356.1 YjzC family protein -
  ACL6EQ_RS05130 (ACL6EQ_05130) yjzD 1008722..1008907 (-) 186 WP_003245236.1 YjzD family protein -
  ACL6EQ_RS05135 (ACL6EQ_05135) - 1009158..1009892 (+) 735 WP_032721340.1 hypothetical protein -
  ACL6EQ_RS05140 (ACL6EQ_05140) - 1009974..1010531 (+) 558 WP_003232974.1 hypothetical protein -
  ACL6EQ_RS05145 (ACL6EQ_05145) med 1010622..1011575 (+) 954 WP_014476425.1 transcriptional regulator Med Regulator
  ACL6EQ_RS05150 (ACL6EQ_05150) comZ 1011590..1011781 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  ACL6EQ_RS05155 (ACL6EQ_05155) yjzB 1011811..1012047 (-) 237 WP_413360401.1 spore coat protein YjzB -
  ACL6EQ_RS05160 (ACL6EQ_05160) fabH 1012212..1013150 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  ACL6EQ_RS05165 (ACL6EQ_05165) fabF 1013173..1014414 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  ACL6EQ_RS05170 (ACL6EQ_05170) yjaZ 1014490..1015275 (+) 786 WP_134982187.1 DUF2268 domain-containing protein -
  ACL6EQ_RS05175 (ACL6EQ_05175) appD 1015467..1016453 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence


Protein


Download         Length: 317 a.a.        Molecular weight: 35310.84 Da        Isoelectric Point: 4.6031

>NTDB_id=1090748 ACL6EQ_RS05145 WP_014476425.1 1010622..1011575(+) (med) [Bacillus subtilis strain SY1483]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=1090748 ACL6EQ_RS05145 WP_014476425.1 1010622..1011575(+) (med) [Bacillus subtilis strain SY1483]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0K6M9I2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

99.685

100

0.997


Multiple sequence alignment