Detailed information    

insolico Bioinformatically predicted

Overview


Name   nin/comJ   Type   Regulator
Locus tag   ACL6EQ_RS01060 Genome accession   NZ_CP178716
Coordinates   211509..211907 (-) Length   132 a.a.
NCBI ID   WP_015252845.1    Uniprot ID   -
Organism   Bacillus subtilis strain SY1483     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context


Location: 206509..216907
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACL6EQ_RS01025 (ACL6EQ_01025) - 207255..207452 (+) 198 WP_120363256.1 hypothetical protein -
  ACL6EQ_RS01030 (ACL6EQ_01030) yckC 207472..207927 (+) 456 WP_024572178.1 RDD family protein -
  ACL6EQ_RS01035 (ACL6EQ_01035) yckD 208009..208341 (+) 333 WP_015252849.1 YckD family protein -
  ACL6EQ_RS01040 (ACL6EQ_01040) - 208469..208891 (+) 423 WP_174616579.1 MarR family winged helix-turn-helix transcriptional regulator -
  ACL6EQ_RS01045 (ACL6EQ_01045) - 208879..209220 (+) 342 WP_032724911.1 DUF3147 family protein -
  ACL6EQ_RS01050 (ACL6EQ_01050) - 209239..209967 (+) 729 WP_413359782.1 AAA family ATPase -
  ACL6EQ_RS01055 (ACL6EQ_01055) bglC 210039..211472 (+) 1434 WP_217020470.1 6-phospho-beta-glucosidase -
  ACL6EQ_RS01060 (ACL6EQ_01060) nin/comJ 211509..211907 (-) 399 WP_015252845.1 DNA-entry nuclease inhibitor Regulator
  ACL6EQ_RS01065 (ACL6EQ_01065) nucA/comI 211934..212383 (-) 450 WP_017696127.1 DNA-entry nuclease Machinery gene
  ACL6EQ_RS01070 (ACL6EQ_01070) tlpC 212551..214272 (-) 1722 WP_413359787.1 methyl-accepting chemotaxis protein TlpC -
  ACL6EQ_RS01075 (ACL6EQ_01075) hxlB 214383..214940 (-) 558 WP_413359790.1 6-phospho-3-hexuloisomerase -
  ACL6EQ_RS01080 (ACL6EQ_01080) hxlA 214946..215578 (-) 633 WP_003234604.1 3-hexulose-6-phosphate synthase -
  ACL6EQ_RS01085 (ACL6EQ_01085) hxlR 215810..216172 (+) 363 WP_003246265.1 transcriptional activator HxlR -

Sequence


Protein


Download         Length: 132 a.a.        Molecular weight: 14935.86 Da        Isoelectric Point: 4.7078

>NTDB_id=1090734 ACL6EQ_RS01060 WP_015252845.1 211509..211907(-) (nin/comJ) [Bacillus subtilis strain SY1483]
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILLRLNSSETVNSYETKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=1090734 ACL6EQ_RS01060 WP_015252845.1 211509..211907(-) (nin/comJ) [Bacillus subtilis strain SY1483]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAACTCCTACGAAACAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATCATGTCTAAAAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains


Predicted by InterproScan.

(9-129)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

98.485

100

0.985


Multiple sequence alignment