Detailed information NTG1090693

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACLKML_RS13045
• Genome accession: NZ_CP178628
• Coordinates: 1169383..1170387 (-)
• Length: 334 a.a.
• NCBI ID: WP_413285672.1
• Uniprot ID: -
• Organism: Vibrio sp. MA40-2
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 1164383..1175387

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLKML_RS13015 (ACLKML_13015)	zapB	1164481..1164723 (+)	243	WP_413285667.1	cell division protein ZapB	-
ACLKML_RS13020 (ACLKML_13020)	rraA	1164879..1165421 (-)	543	WP_413285668.1	ribonuclease E activity regulator RraA	-
ACLKML_RS13025 (ACLKML_13025)	-	1165499..1166416 (-)	918	WP_413285669.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACLKML_RS13030 (ACLKML_13030)	hslU	1166566..1167897 (-)	1332	WP_413285670.1	HslU--HslV peptidase ATPase subunit	-
ACLKML_RS13035 (ACLKML_13035)	hslV	1167927..1168445 (-)	519	WP_317717900.1	ATP-dependent protease subunit HslV	-
ACLKML_RS13040 (ACLKML_13040)	-	1168648..1169190 (-)	543	WP_413285671.1	SPOR domain-containing protein	-
ACLKML_RS13045 (ACLKML_13045)	cytR	1169383..1170387 (-)	1005	WP_413285672.1	DNA-binding transcriptional regulator CytR	Regulator
ACLKML_RS13050 (ACLKML_13050)	priA	1170569..1172770 (-)	2202	WP_413285673.1	primosomal protein N'	-
ACLKML_RS13055 (ACLKML_13055)	rpmE	1173106..1173321 (+)	216	WP_272132745.1	50S ribosomal protein L31	-
ACLKML_RS13060 (ACLKML_13060)	-	1173551..1174810 (+)	1260	WP_413285674.1	malic enzyme-like NAD(P)-binding protein	-
ACLKML_RS13065 (ACLKML_13065)	metJ	1174884..1175204 (-)	321	WP_317717895.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36650.12 Da
• Isoelectric Point: 6.9371

>NTDB_id=1090693 ACLKML_RS13045 WP_413285672.1 1169383..1170387(-) (cytR) [Vibrio sp. MA40-2]
MATMKDVAQLAGVSTATVSRALMNPEKVSASTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVTIVPDICDPYFTEIIRG
IEDAATEHGYLVLLGDSGMQQKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPLVMACEYAPELELPTVHIDN
LTSAFEAVNYLTQMGHKKIAQISGPEESALCKFRHQGYQQALRRAGIALNSAYCTSSNFTFEGGAKALRKLQSLPDAPTA
IFCHNDTMAIGAIQEAKKLGLRVPQDISLVGFDDIQFSQYCDPPLTTVSQPRYEIGRQAMLMMLELLKGRDVRAGSRLLE
TQLVIRNSVAPPKA

Nucleotide

• Length: 1005 bp

>NTDB_id=1090693 ACLKML_RS13045 WP_413285672.1 1169383..1170387(-) (cytR) [Vibrio sp. MA40-2]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCCGGTGTTTCTACGGCTACGGTTTCTCGTGCTCTAATGAACCCTGAAAA
GGTATCTGCATCAACTCGCAAACGTGTAGAAGACGCTGTACTCGAAGCTGGATATTCCCCCAACTCTCTGGCTAGAAATC
TACGTAGGAATGAGTCAAAAACCATTGTCACCATCGTACCCGATATATGTGATCCCTATTTCACCGAAATCATTCGTGGT
ATTGAAGACGCAGCAACAGAACATGGCTATCTTGTTCTGTTAGGCGACAGTGGTATGCAACAAAAAAGAGAAAGCTCTTT
TGTTAATCTTGTCTTTACTAAACAAGCTGATGGCATGCTCTTACTCGGTACGGATTTACCTTTCGATGTAAGCAAACCCG
AACAAAAAAACCTCCCTCCTCTTGTGATGGCTTGCGAATACGCTCCAGAGTTGGAACTACCAACAGTCCACATTGACAAC
TTAACGTCAGCTTTCGAGGCCGTAAATTACCTCACTCAGATGGGGCATAAAAAAATAGCGCAAATATCTGGCCCAGAAGA
GTCTGCATTATGTAAGTTTAGGCACCAAGGATATCAACAAGCGTTGCGTCGAGCTGGCATTGCACTTAATTCTGCTTATT
GTACTTCTAGTAACTTCACCTTTGAAGGTGGAGCAAAAGCACTGAGAAAATTACAATCTTTACCCGATGCGCCTACGGCT
ATCTTTTGTCATAATGACACAATGGCAATTGGAGCCATTCAAGAAGCGAAAAAATTAGGCCTACGCGTTCCGCAAGATAT
ATCACTGGTAGGTTTTGATGATATTCAATTTTCACAATACTGCGATCCTCCACTAACCACCGTCTCCCAACCTAGATACG
AGATTGGCAGACAAGCGATGCTAATGATGCTAGAGCTATTAAAAGGTCGAGATGTGAGAGCAGGTTCAAGATTACTAGAA
ACCCAATTGGTGATAAGAAATAGCGTTGCTCCACCCAAGGCATAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-329)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	87.349	99.401	0.868
cytR	Vibrio parahaemolyticus RIMD 2210633	85.886	99.701	0.856