Detailed information
Bioinformatically predicted
Overview
| Name | luxP | Type | Regulator |
| Locus tag | ACLKML_RS01035 | Genome accession | NZ_CP178627 |
| Coordinates | 253250..254443 (+) | Length | 397 a.a. |
| NCBI ID | WP_413283240.1 | Uniprot ID | - |
| Organism | Vibrio sp. MA40-2 | ||
| Function | autoinducer sensor (predicted from homology) Competence regulation |
||
Genomic Context
Location: 248250..259443
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACLKML_RS00995 (ACLKML_00995) | - | 248931..249533 (-) | 603 | WP_413283233.1 | hypothetical protein | - |
| ACLKML_RS01000 (ACLKML_01000) | - | 249689..249997 (-) | 309 | WP_413283234.1 | DUF406 family protein | - |
| ACLKML_RS01005 (ACLKML_01005) | - | 250240..250707 (+) | 468 | WP_413283235.1 | TetR/AcrR family transcriptional regulator | - |
| ACLKML_RS01010 (ACLKML_01010) | - | 250794..251039 (-) | 246 | WP_413283236.1 | YgjV family protein | - |
| ACLKML_RS01015 (ACLKML_01015) | - | 251391..251705 (-) | 315 | WP_413283237.1 | DUF496 family protein | - |
| ACLKML_RS01020 (ACLKML_01020) | - | 251984..252148 (+) | 165 | WP_413283238.1 | hypothetical protein | - |
| ACLKML_RS01025 (ACLKML_01025) | - | 252246..252911 (+) | 666 | WP_413283239.1 | YceH family protein | - |
| ACLKML_RS01030 (ACLKML_01030) | - | 252956..253231 (+) | 276 | WP_413283709.1 | GIY-YIG nuclease family protein | - |
| ACLKML_RS01035 (ACLKML_01035) | luxP | 253250..254443 (+) | 1194 | WP_413283240.1 | substrate-binding domain-containing protein | Regulator |
| ACLKML_RS01040 (ACLKML_01040) | - | 254440..257004 (+) | 2565 | WP_413283241.1 | LuxQ periplasmic sensor domain-containing protein | - |
| ACLKML_RS01045 (ACLKML_01045) | - | 257001..257672 (-) | 672 | WP_413283242.1 | PilZ domain-containing protein | - |
| ACLKML_RS01050 (ACLKML_01050) | - | 257975..258256 (-) | 282 | WP_413283243.1 | hypothetical protein | - |
| ACLKML_RS01055 (ACLKML_01055) | - | 258376..258540 (-) | 165 | WP_413283244.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 397 a.a. Molecular weight: 44926.97 Da Isoelectric Point: 7.1288
>NTDB_id=1090681 ACLKML_RS01035 WP_413283240.1 253250..254443(+) (luxP) [Vibrio sp. MA40-2]
MNRTFTLLALVMSIILHSQQAFSVEILSPYWKYSEYLDTFPEQKKLTDELARIIKQPSSPIAIMQKQPVDISVIYPGEQE
SDYWRRNMRAFEARLKELNIQYVLKQVFTRPNLDARQQNLSLNNALTQNTDYLIFTLDTGRHKKFIEHVLHSSNVKLILQ
NITTPVKAWDGNQPFLYLGFDHLLGSMALADYFKSSMPEGADYSVLYYSQGYISDVRGDTFIDAMSEKDSASKTTALVDN
LSTTPSSGTNSSVRETSLNKFNLKSSFYTKASKQSGYAAAKSAIAEFPDVDFLYVCSTDVALGALEALRDLNKQHIKVNG
WGGGANELDLIRQGKLDVTVMRMNDDTGVAMAEAIKWDIEGKQVPTVYSGHFEIVSKKDSQQKIDRLKKYAFRYSDQ
MNRTFTLLALVMSIILHSQQAFSVEILSPYWKYSEYLDTFPEQKKLTDELARIIKQPSSPIAIMQKQPVDISVIYPGEQE
SDYWRRNMRAFEARLKELNIQYVLKQVFTRPNLDARQQNLSLNNALTQNTDYLIFTLDTGRHKKFIEHVLHSSNVKLILQ
NITTPVKAWDGNQPFLYLGFDHLLGSMALADYFKSSMPEGADYSVLYYSQGYISDVRGDTFIDAMSEKDSASKTTALVDN
LSTTPSSGTNSSVRETSLNKFNLKSSFYTKASKQSGYAAAKSAIAEFPDVDFLYVCSTDVALGALEALRDLNKQHIKVNG
WGGGANELDLIRQGKLDVTVMRMNDDTGVAMAEAIKWDIEGKQVPTVYSGHFEIVSKKDSQQKIDRLKKYAFRYSDQ
Nucleotide
Download Length: 1194 bp
>NTDB_id=1090681 ACLKML_RS01035 WP_413283240.1 253250..254443(+) (luxP) [Vibrio sp. MA40-2]
ATGAATAGGACGTTTACGTTATTAGCATTGGTTATGTCAATTATATTGCATTCCCAACAAGCCTTTTCAGTTGAAATACT
GAGTCCTTATTGGAAGTATTCTGAATATTTAGACACATTCCCTGAACAAAAAAAGTTAACCGATGAACTAGCAAGAATCA
TCAAACAACCGTCATCTCCTATCGCCATCATGCAAAAGCAACCTGTGGATATTTCGGTAATTTATCCTGGTGAGCAGGAG
TCTGATTATTGGCGACGGAATATGCGTGCTTTTGAAGCTCGTTTAAAAGAATTAAATATTCAATATGTATTGAAACAGGT
TTTTACTCGACCCAATTTAGATGCTCGACAACAAAATTTGTCATTAAACAATGCGTTAACACAAAATACCGACTATTTGA
TTTTTACCCTTGATACGGGAAGACATAAAAAATTTATTGAACATGTATTACACAGCTCAAATGTCAAACTGATTCTACAA
AATATTACCACACCAGTTAAAGCCTGGGATGGAAATCAACCTTTCTTATACCTTGGTTTTGATCATCTATTGGGCAGTAT
GGCGTTGGCGGATTATTTTAAGTCGTCAATGCCAGAAGGTGCAGATTATTCGGTGTTGTATTATTCACAAGGTTATATTA
GCGATGTTCGAGGGGATACGTTTATTGATGCTATGTCTGAAAAAGATAGCGCGTCAAAAACTACTGCTTTAGTCGATAAT
TTATCAACAACCCCTTCTTCTGGCACCAATTCTTCTGTCCGAGAAACTTCTTTAAACAAATTTAACCTTAAATCCTCATT
TTATACTAAAGCCAGTAAGCAAAGTGGTTATGCTGCAGCAAAATCTGCTATCGCTGAATTTCCGGATGTTGATTTTTTAT
ATGTGTGTTCTACAGATGTTGCCCTAGGCGCATTGGAAGCGTTACGAGATTTAAATAAACAACACATTAAAGTTAATGGT
TGGGGGGGAGGAGCTAATGAGCTTGATTTGATACGACAAGGAAAGCTGGATGTCACTGTTATGCGGATGAATGATGATAC
AGGAGTGGCTATGGCTGAAGCGATTAAATGGGACATCGAAGGTAAACAGGTCCCTACTGTATATTCTGGTCATTTTGAAA
TTGTTAGCAAAAAAGACAGTCAACAAAAAATCGATCGTTTAAAGAAATACGCTTTTAGGTACTCCGACCAGTGA
ATGAATAGGACGTTTACGTTATTAGCATTGGTTATGTCAATTATATTGCATTCCCAACAAGCCTTTTCAGTTGAAATACT
GAGTCCTTATTGGAAGTATTCTGAATATTTAGACACATTCCCTGAACAAAAAAAGTTAACCGATGAACTAGCAAGAATCA
TCAAACAACCGTCATCTCCTATCGCCATCATGCAAAAGCAACCTGTGGATATTTCGGTAATTTATCCTGGTGAGCAGGAG
TCTGATTATTGGCGACGGAATATGCGTGCTTTTGAAGCTCGTTTAAAAGAATTAAATATTCAATATGTATTGAAACAGGT
TTTTACTCGACCCAATTTAGATGCTCGACAACAAAATTTGTCATTAAACAATGCGTTAACACAAAATACCGACTATTTGA
TTTTTACCCTTGATACGGGAAGACATAAAAAATTTATTGAACATGTATTACACAGCTCAAATGTCAAACTGATTCTACAA
AATATTACCACACCAGTTAAAGCCTGGGATGGAAATCAACCTTTCTTATACCTTGGTTTTGATCATCTATTGGGCAGTAT
GGCGTTGGCGGATTATTTTAAGTCGTCAATGCCAGAAGGTGCAGATTATTCGGTGTTGTATTATTCACAAGGTTATATTA
GCGATGTTCGAGGGGATACGTTTATTGATGCTATGTCTGAAAAAGATAGCGCGTCAAAAACTACTGCTTTAGTCGATAAT
TTATCAACAACCCCTTCTTCTGGCACCAATTCTTCTGTCCGAGAAACTTCTTTAAACAAATTTAACCTTAAATCCTCATT
TTATACTAAAGCCAGTAAGCAAAGTGGTTATGCTGCAGCAAAATCTGCTATCGCTGAATTTCCGGATGTTGATTTTTTAT
ATGTGTGTTCTACAGATGTTGCCCTAGGCGCATTGGAAGCGTTACGAGATTTAAATAAACAACACATTAAAGTTAATGGT
TGGGGGGGAGGAGCTAATGAGCTTGATTTGATACGACAAGGAAAGCTGGATGTCACTGTTATGCGGATGAATGATGATAC
AGGAGTGGCTATGGCTGAAGCGATTAAATGGGACATCGAAGGTAAACAGGTCCCTACTGTATATTCTGGTCATTTTGAAA
TTGTTAGCAAAAAAGACAGTCAACAAAAAATCGATCGTTTAAAGAAATACGCTTTTAGGTACTCCGACCAGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxP | Vibrio cholerae strain A1552 |
53.333 |
98.237 |
0.524 |