Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   ACKUFW_RS07075 Genome accession   NZ_CP178610
Coordinates   1343886..1344482 (+) Length   198 a.a.
NCBI ID   WP_070081746.1    Uniprot ID   -
Organism   Bacillus velezensis strain GUMHT p116     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1338886..1349482
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACKUFW_RS07045 (ACKUFW_07045) - 1339101..1339556 (+) 456 WP_071391903.1 flavodoxin -
  ACKUFW_RS07050 (ACKUFW_07050) dapD 1339638..1340348 (+) 711 WP_007409623.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  ACKUFW_RS07055 (ACKUFW_07055) - 1340419..1341543 (+) 1125 WP_071391902.1 N-acetyldiaminopimelate deacetylase -
  ACKUFW_RS07060 (ACKUFW_07060) - 1341604..1341849 (+) 246 WP_003154596.1 YkuS family protein -
  ACKUFW_RS07065 (ACKUFW_07065) - 1341883..1342689 (-) 807 WP_060386912.1 mechanosensitive ion channel family protein -
  ACKUFW_RS07070 (ACKUFW_07070) - 1342976..1343434 (+) 459 WP_071391901.1 redoxin domain-containing protein -
  ACKUFW_RS07075 (ACKUFW_07075) rok 1343886..1344482 (+) 597 WP_070081746.1 transcriptional regulator Rok Regulator
  ACKUFW_RS07080 (ACKUFW_07080) - 1344503..1345495 (-) 993 WP_071391899.1 sporulation protein -
  ACKUFW_RS07085 (ACKUFW_07085) - 1345641..1346243 (+) 603 WP_202735943.1 molybdenum cofactor guanylyltransferase -
  ACKUFW_RS07090 (ACKUFW_07090) - 1346295..1347314 (+) 1020 WP_039062999.1 molybdopterin-synthase adenylyltransferase MoeB -
  ACKUFW_RS07095 (ACKUFW_07095) glp 1347332..1348624 (+) 1293 WP_071391896.1 gephyrin-like molybdotransferase Glp -
  ACKUFW_RS07100 (ACKUFW_07100) mobB 1348585..1349106 (+) 522 WP_041482361.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22583.61 Da        Isoelectric Point: 9.6909

>NTDB_id=1090468 ACKUFW_RS07075 WP_070081746.1 1343886..1344482(+) (rok) [Bacillus velezensis strain GUMHT p116]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKNDSLPVLAELAAQEMRSYQKPQ
TQPQSSQQQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=1090468 ACKUFW_RS07075 WP_070081746.1 1343886..1344482(+) (rok) [Bacillus velezensis strain GUMHT p116]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACGGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAATGACTCCCTCCCGGTACTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
ACACAGCCTCAATCCTCCCAGCAGCAGATGCAGTCTATTACGTCTCTTCCCGCAGGCATTCCAGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCGAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACATTGAAACGCCACAATG
CAGCGATCAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

87.629

97.98

0.859

Multiple sequence alignment