Detailed information NTG1090459

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: ACKUFW_RS05550
• Genome accession: NZ_CP178610
• Coordinates: 1069659..1070612 (+)
• Length: 317 a.a.
• NCBI ID: WP_070081621.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain GUMHT p116
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1064659..1075612

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACKUFW_RS05525 (ACKUFW_05525)	argF	1066477..1067448 (+)	972	WP_101562891.1	ornithine carbamoyltransferase	-
ACKUFW_RS05530 (ACKUFW_05530)	-	1067524..1067703 (+)	180	WP_003155070.1	YjzC family protein	-
ACKUFW_RS05535 (ACKUFW_05535)	-	1067740..1067925 (-)	186	WP_032874447.1	YjzD family protein	-
ACKUFW_RS05540 (ACKUFW_05540)	-	1068186..1068920 (+)	735	WP_070081619.1	hypothetical protein	-
ACKUFW_RS05545 (ACKUFW_05545)	-	1069003..1069569 (+)	567	WP_071391998.1	hypothetical protein	-
ACKUFW_RS05550 (ACKUFW_05550)	med	1069659..1070612 (+)	954	WP_070081621.1	BMP family ABC transporter substrate-binding protein	Regulator
ACKUFW_RS05555 (ACKUFW_05555)	comZ	1070625..1070816 (+)	192	WP_003155061.1	ComZ family protein	Regulator
ACKUFW_RS05560 (ACKUFW_05560)	-	1070846..1071064 (-)	219	WP_003155059.1	hypothetical protein	-
ACKUFW_RS05565 (ACKUFW_05565)	-	1071232..1072170 (+)	939	WP_007409122.1	beta-ketoacyl-ACP synthase III	-
ACKUFW_RS05570 (ACKUFW_05570)	fabF	1072193..1073431 (+)	1239	WP_003155056.1	beta-ketoacyl-ACP synthase II	-
ACKUFW_RS05575 (ACKUFW_05575)	-	1073515..1074300 (+)	786	WP_012117278.1	DUF2268 domain-containing protein	-
ACKUFW_RS05580 (ACKUFW_05580)	-	1074474..1075460 (+)	987	WP_029325950.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35315.92 Da
• Isoelectric Point: 4.5594

>NTDB_id=1090459 ACKUFW_RS05550 WP_070081621.1 1069659..1070612(+) (med) [Bacillus velezensis strain GUMHT p116]
MITRLVMIFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHDFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNQTNELPSNE

Nucleotide

• Length: 954 bp

>NTDB_id=1090459 ACKUFW_RS05550 WP_070081621.1 1069659..1070612(+) (med) [Bacillus velezensis strain GUMHT p116]
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCACCTTATGGGAGAAGCAA
TGGGCTTTTTCGGGGGAATGACGGCCGCCCATATGTCAAAAACCAATGAGGTAGGTGTCATCGCCTCCTTTCTGTGGCAG
CCAGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAAGCCTGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTATGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACGACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCGCTGGTGGACA
AAGCGTTTCAAGACAAAATCTCAGACCTTGTAAAAACGTATAACCAAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	78.549	100	0.785