Detailed information NTG1090437

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ACLRDN_RS21585
• Genome accession: NZ_CP178608
• Coordinates: 4713248..4714396 (+)
• Length: 382 a.a.
• NCBI ID: WP_413457938.1
• Uniprot ID: -
• Organism: Herbaspirillum huttiense strain HhutSZ1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4708248..4719396

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLRDN_RS21560 (ACLRDN_21560)	coaD	4708305..4708787 (-)	483	WP_006461533.1	pantetheine-phosphate adenylyltransferase	-
ACLRDN_RS21565 (ACLRDN_21565)	rsmD	4708824..4709492 (-)	669	WP_413457934.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ACLRDN_RS21570 (ACLRDN_21570)	-	4709548..4710870 (-)	1323	WP_413457935.1	M16 family metallopeptidase	-
ACLRDN_RS21575 (ACLRDN_21575)	-	4710908..4711567 (-)	660	WP_413457936.1	AAA family ATPase	-
ACLRDN_RS21580 (ACLRDN_21580)	-	4711699..4713078 (-)	1380	WP_413457937.1	M16 family metallopeptidase	-
ACLRDN_RS21585 (ACLRDN_21585)	pilA	4713248..4714396 (+)	1149	WP_413457938.1	signal recognition particle-docking protein FtsY	Machinery gene
ACLRDN_RS21590 (ACLRDN_21590)	-	4714401..4715093 (+)	693	WP_413457939.1	cell division ATP-binding protein FtsE	-
ACLRDN_RS21595 (ACLRDN_21595)	ftsX	4715090..4716013 (+)	924	WP_413457940.1	permease-like cell division protein FtsX	-
ACLRDN_RS21600 (ACLRDN_21600)	rpoH	4716570..4717469 (+)	900	WP_145604896.1	RNA polymerase sigma factor RpoH	-
ACLRDN_RS21605 (ACLRDN_21605)	-	4717558..4718148 (-)	591	WP_413457941.1	SCO family protein	-
ACLRDN_RS21610 (ACLRDN_21610)	cyoE	4718161..4719054 (-)	894	WP_134223499.1	heme o synthase	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 40415.67 Da
• Isoelectric Point: 5.7283

>NTDB_id=1090437 ACLRDN_RS21585 WP_413457938.1 4713248..4714396(+) (pilA) [Herbaspirillum huttiense strain HhutSZ1]
MFSFFKRKPKPEAQPALPPQAEPAPQPAPAPSVAPAAVEAPVPAPAPIAPVEPVSAPEPEPVATEAPAAEEVEIVAAPEP
APEAKRSWLSRLKAGLSKTSSNLTTLFVGARIDEDLYEELESALLVSDAGVEATQWLLAELKKKVKNERLTEAAQVRTAL
RTLLIDLLQPLQRPLVLGRDKPMVMMIAGVNGAGKTTTIGKLALHLQAHGQSVLLAAGDTFRAAAREQLAVWGERNNVQV
IAQESGDPAAVAYDSVHSAQARGTHVVMVDTAGRLPTQLHLMDELKKIKRVIAKAMNSAPHEVLLVIDGNTGQNALAQVK
AFDDALGLTGLVVTKLDGTAKGGILAAIAKTRPVPLYFIGVGEKIEDLQPFNATEFVDALLS

Nucleotide

• Length: 1149 bp

>NTDB_id=1090437 ACLRDN_RS21585 WP_413457938.1 4713248..4714396(+) (pilA) [Herbaspirillum huttiense strain HhutSZ1]
ATGTTCAGTTTTTTCAAAAGAAAACCCAAACCGGAAGCGCAACCCGCGCTGCCGCCCCAGGCCGAACCGGCGCCCCAGCC
TGCTCCTGCTCCCTCCGTTGCCCCTGCTGCCGTTGAGGCGCCTGTTCCTGCGCCCGCACCGATAGCGCCGGTGGAGCCGG
TGTCTGCGCCGGAACCGGAACCAGTCGCCACCGAAGCGCCTGCGGCTGAAGAAGTCGAGATCGTCGCCGCGCCGGAACCT
GCGCCCGAGGCCAAGCGTTCCTGGCTCTCGCGCCTGAAGGCCGGGCTGTCCAAGACCTCCAGCAACCTGACCACGCTCTT
CGTCGGTGCGCGCATTGATGAAGACTTGTACGAGGAGCTGGAATCGGCCCTGCTGGTATCGGACGCCGGCGTGGAAGCCA
CCCAGTGGCTGCTGGCTGAACTGAAGAAAAAAGTCAAAAACGAGCGCCTGACCGAAGCCGCCCAGGTGCGCACCGCCCTG
CGCACCCTGCTCATCGACCTGCTGCAGCCGCTGCAGCGCCCGCTGGTGCTGGGCCGCGACAAGCCGATGGTGATGATGAT
TGCCGGCGTCAACGGTGCCGGCAAGACCACCACCATCGGCAAGCTGGCCCTGCATCTGCAGGCGCACGGCCAGTCGGTGC
TGCTGGCCGCCGGCGACACCTTCCGCGCGGCCGCCCGCGAGCAGCTGGCGGTCTGGGGCGAGCGCAACAACGTCCAGGTG
ATCGCCCAGGAATCCGGCGATCCGGCCGCCGTGGCCTATGACTCGGTGCATTCGGCACAGGCGCGCGGCACCCATGTGGT
GATGGTCGATACCGCCGGCCGCCTGCCGACGCAATTGCACCTGATGGATGAACTCAAGAAGATCAAGCGGGTCATTGCCA
AGGCGATGAACTCGGCGCCGCACGAAGTGCTGCTGGTCATCGACGGCAACACCGGCCAGAATGCGCTGGCCCAGGTCAAG
GCCTTCGATGATGCGCTGGGGCTGACCGGGTTGGTCGTGACCAAGCTCGATGGCACGGCCAAGGGCGGCATCCTGGCCGC
CATCGCCAAGACCCGCCCGGTGCCGCTGTATTTCATCGGCGTGGGCGAGAAGATCGAAGACCTGCAGCCCTTCAACGCCA
CCGAATTCGTCGATGCCCTCCTGAGTTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (102-161)

• SRP54-type protein, GTPase domain (SRP54) (183-381)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	52.278	100	0.571