Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   ACJQW4_RS09015 Genome accession   NZ_CP178606
Coordinates   1913864..1918333 (+) Length   1489 a.a.
NCBI ID   WP_241627902.1    Uniprot ID   -
Organism   Acinetobacter sp. A7.4     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 1908864..1923333
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJQW4_RS08990 (ACJQW4_08990) - 1909346..1909987 (-) 642 WP_241627898.1 hypothetical protein -
  ACJQW4_RS08995 (ACJQW4_08995) pilG 1910273..1910656 (+) 384 WP_004723803.1 twitching motility response regulator PilG Regulator
  ACJQW4_RS09000 (ACJQW4_09000) - 1910677..1911045 (+) 369 WP_241627899.1 response regulator -
  ACJQW4_RS09005 (ACJQW4_09005) - 1911049..1911585 (+) 537 WP_241627900.1 chemotaxis protein CheW -
  ACJQW4_RS09010 (ACJQW4_09010) - 1911634..1913706 (+) 2073 WP_241627901.1 methyl-accepting chemotaxis protein -
  ACJQW4_RS09015 (ACJQW4_09015) chpA 1913864..1918333 (+) 4470 WP_241627902.1 Hpt domain-containing protein Regulator
  ACJQW4_RS09020 (ACJQW4_09020) - 1918338..1918802 (+) 465 WP_241627903.1 hypothetical protein -
  ACJQW4_RS09025 (ACJQW4_09025) dapE 1918865..1919998 (-) 1134 WP_241627904.1 succinyl-diaminopimelate desuccinylase -
  ACJQW4_RS09030 (ACJQW4_09030) - 1920115..1920255 (-) 141 WP_241627905.1 entericidin A/B family lipoprotein -
  ACJQW4_RS09035 (ACJQW4_09035) - 1920383..1921255 (-) 873 WP_241627906.1 DUF1853 family protein -
  ACJQW4_RS09040 (ACJQW4_09040) - 1921352..1921717 (+) 366 WP_241627907.1 YbaN family protein -
  ACJQW4_RS09045 (ACJQW4_09045) elsL 1921769..1922275 (+) 507 WP_241627908.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence


Protein


Download         Length: 1489 a.a.        Molecular weight: 167228.89 Da        Isoelectric Point: 4.3732

>NTDB_id=1090416 ACJQW4_RS09015 WP_241627902.1 1913864..1918333(+) (chpA) [Acinetobacter sp. A7.4]
MKEILKNLVDTTTLPEDSYLEQDAEILEIFVEEIEEIFEELDSVFVQWLANPSDQETLTIIRRHFHTLKGSGRMVGAKSA
GELAWVVEDTLNRVIFGSVALDSKIQKFAQAVYRIFQYKLYPQFKSVQATEIDLRPLLLLGQQLQQGLTLEPALEELLLL
ADQLNSPEQMTGLEFTASEEDQVAEEARVEPVQESNDLQEVTTSIFIEEAEEHLATIDHFLKQEADEVPDYNGLIRALHT
LRGSSSMAHIQQIFDASSKVENLFKTLLQEEIVSGSNETALLIQYAEFVRDFLHILRQGKLEELSQIDQTFNQVWEDYGF
NQEDFDATANPQGLVSQLIELDIDLLLDAELEFEKRAKTEFPAYVEQLSQKAQLLAEHTDNRATQGIHVFVQTLDECYQA
LLAKAALLNIDYAYELFAQAHQEFIYLFDTLAAGQRISLSEQAQHVLQNLTAFVQQDLEIFDEAELSTLEETASTTIEES
SHIEESAKGTAVDFAVLSKRIHSDAQLVDAEDANRQFDEDLLDIFLEEADELLMGIDQDVQTWSHDQSNTAALNNLMRYL
HTLKGGANMIQATHIGLISHELETIYERIINQQIQASPALIQIIRLVQDNIADRIQIIREQRVDYPAPEAIDILNNIQAL
VAGVAVSTVTETVIEQKLPAVEHVAAYATTSVDAPVLPPIQPVITPAEEKEIIAWTEPTSIVQSVVSEEDDSVRSIVEET
FLEEAAEIFDTMESLLQQWIEQRSDRSLLLQLQRAAHSLKGGARMAEIEAVGAISYRLESAFEQFAVHHFNSNVYDPLLK
TTIAWLRHAIFEHDYSNFDSLKASLEAIEYADVTVQLPTRNTPAQVQITAPSFEFIQGDGTEPPAMMGEWETSGQTDQSN
EMIRISADLIEKMIDLSGENSINRSRIEMDLGQLGNTLNEMELAIKRLADQLRRMEGELESQIIAKHGSEVGRYADFDPL
EMDQYSSLNQLSKSLAESASDLVDFKTTLAEKIRDTESLLLQQSRIQAEIQEGLMRTRLVPFTRLLPRLQRIVRQTSSTL
NRPAELIVNNTEGELDRTILERLVTPLEHMLRNAVDHGIEDPEQRQLAHKPEVGRIELNISRQGTDVMVEFHDDGKGIDV
AKIKEKAISLGLMKADQQLEKQEILQFIFHPGFSTAQQITQISGRGVGLDVVQSAIKALGGHVAVDSTFGKGTSFSIRVP
TTVAVSDALMVKSGDQQFAVPLAQIERIVRIAPNALESYFNSKEDYFKIDNESYKLRYLSEFVSNQPLPRLGSIAHSLPV
LLIKGNSGQTIALLVDQLIGSRAQIVVKPIGQQFSAIGAIAGATILGDGQVCLILDGQNIARQIQTTQRVKHANDQRDSY
RYSATRRLIMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAMEQLENVKPDLMLLDIEMPRMDGFEVTNLIRHHEIHKQ
LPIIMITSRTGEKHRERAFSLGVTHYMGKPFQEADLLNNIESLLTVKQG

Nucleotide


Download         Length: 4470 bp        

>NTDB_id=1090416 ACJQW4_RS09015 WP_241627902.1 1913864..1918333(+) (chpA) [Acinetobacter sp. A7.4]
ATGAAAGAAATATTAAAAAATTTAGTCGATACGACAACGCTTCCAGAAGATAGTTATCTTGAACAAGATGCTGAAATTCT
AGAGATCTTTGTAGAAGAAATTGAAGAAATTTTTGAAGAGCTAGACAGCGTTTTTGTGCAATGGTTAGCAAATCCCTCAG
ATCAAGAAACTTTAACGATCATTCGTCGACACTTTCATACACTGAAAGGTTCGGGTCGTATGGTGGGCGCGAAATCTGCA
GGTGAGCTGGCGTGGGTGGTGGAAGATACATTAAATCGTGTCATTTTTGGTTCAGTGGCTTTAGATAGCAAGATCCAAAA
ATTTGCTCAAGCGGTTTATCGTATTTTCCAGTATAAACTGTATCCTCAGTTTAAATCGGTTCAAGCAACAGAAATCGATT
TACGACCATTGCTACTTTTGGGGCAGCAATTACAGCAAGGGCTAACGCTTGAGCCAGCTTTGGAAGAATTATTGTTATTG
GCGGATCAACTGAATTCACCAGAACAAATGACTGGACTTGAATTCACTGCATCTGAAGAAGATCAAGTGGCAGAGGAAGC
CCGAGTAGAACCTGTTCAAGAATCCAATGATCTTCAAGAAGTCACGACTTCTATCTTTATTGAAGAAGCTGAAGAGCATC
TGGCGACTATTGATCACTTCTTAAAACAAGAAGCGGATGAAGTGCCAGATTATAATGGACTGATTCGAGCATTGCATACT
TTGCGCGGTAGTTCGTCGATGGCGCATATCCAGCAAATTTTTGATGCCAGTTCCAAAGTTGAAAACTTGTTTAAGACATT
ATTACAAGAAGAGATTGTTTCTGGTTCAAATGAAACGGCATTGTTAATTCAATATGCAGAATTCGTGCGTGATTTCTTGC
ATATCCTTCGTCAAGGAAAACTTGAAGAGCTTAGTCAAATTGATCAAACCTTTAATCAGGTGTGGGAAGATTATGGCTTT
AATCAAGAGGACTTTGATGCTACAGCCAATCCGCAAGGTTTAGTCTCTCAGTTAATTGAGTTAGATATTGACTTGTTGTT
AGATGCGGAACTCGAATTTGAAAAACGCGCTAAAACAGAATTCCCTGCATACGTTGAGCAGTTAAGTCAAAAGGCGCAGT
TACTGGCTGAACATACCGATAATCGTGCGACGCAGGGTATTCATGTATTTGTACAGACTTTAGATGAATGCTATCAAGCT
CTATTAGCCAAAGCAGCGTTATTGAATATCGACTATGCCTATGAGTTATTTGCTCAGGCACATCAAGAATTTATTTACCT
TTTCGATACTTTGGCAGCAGGGCAGCGGATCAGTTTGTCTGAGCAAGCACAGCACGTTCTGCAAAACTTAACTGCATTTG
TGCAGCAAGATTTAGAGATTTTTGATGAGGCTGAACTCAGTACGCTAGAAGAAACAGCCTCAACAACGATTGAAGAGTCA
TCTCATATTGAAGAAAGTGCGAAAGGCACCGCAGTCGATTTTGCGGTACTGTCTAAACGTATTCATAGTGATGCTCAATT
GGTCGATGCTGAAGATGCTAATCGTCAGTTTGATGAAGATCTGCTGGATATCTTCCTTGAAGAGGCAGATGAGCTGCTCA
TGGGGATTGACCAAGACGTCCAGACATGGAGTCATGATCAGTCGAACACTGCTGCACTCAATAACTTGATGCGTTATTTG
CATACCTTAAAGGGTGGTGCAAATATGATTCAAGCCACTCATATTGGTTTAATCTCGCATGAGCTAGAAACCATTTATGA
GCGAATTATCAATCAGCAAATTCAGGCATCGCCTGCTTTGATTCAGATTATTCGTTTGGTGCAGGACAATATTGCGGATC
GTATCCAAATCATTCGTGAACAACGCGTTGATTATCCTGCACCAGAAGCTATTGATATTCTAAATAATATTCAAGCCTTG
GTGGCAGGTGTGGCTGTATCTACAGTCACTGAAACCGTGATCGAGCAAAAGCTACCTGCAGTTGAACATGTTGCAGCTTA
TGCAACAACATCTGTGGATGCACCTGTATTACCACCTATACAGCCTGTGATTACGCCTGCAGAAGAAAAGGAAATTATTG
CTTGGACTGAGCCGACATCTATTGTGCAGTCTGTAGTTTCAGAAGAAGATGACAGTGTCCGCTCGATTGTTGAAGAAACA
TTCCTTGAAGAAGCGGCTGAAATCTTCGATACAATGGAATCGTTACTGCAACAGTGGATTGAACAACGTAGTGACCGTAG
TTTATTGCTCCAATTACAACGTGCAGCGCATAGCCTGAAAGGTGGCGCACGTATGGCTGAAATTGAGGCTGTAGGTGCAA
TTTCCTATCGTTTAGAAAGTGCTTTTGAACAGTTTGCAGTACATCATTTCAATTCGAATGTCTATGATCCATTATTGAAA
ACAACAATTGCGTGGTTAAGACATGCAATTTTTGAACATGATTACAGCAATTTCGATAGCTTGAAGGCAAGTCTGGAAGC
GATTGAGTATGCGGATGTCACCGTTCAATTACCAACACGAAACACACCGGCTCAAGTACAAATTACAGCACCAAGCTTTG
AATTTATTCAGGGTGATGGTACTGAGCCACCAGCCATGATGGGTGAGTGGGAGACCTCAGGACAAACCGATCAATCCAAT
GAAATGATTCGAATTTCAGCTGATCTGATTGAAAAGATGATTGATCTATCAGGTGAGAATTCGATTAACCGTTCACGTAT
TGAAATGGACTTAGGTCAATTAGGCAATACCTTGAATGAAATGGAATTGGCGATTAAACGTTTAGCCGATCAGTTACGTC
GAATGGAAGGTGAGTTAGAGTCACAAATTATTGCCAAACATGGCAGTGAAGTCGGACGCTATGCAGACTTTGACCCGCTC
GAAATGGACCAATATTCATCATTGAATCAATTGTCGAAGTCTTTGGCGGAATCTGCATCGGACTTGGTCGATTTCAAGAC
GACTTTAGCTGAAAAAATTCGAGATACCGAAAGTCTGTTACTACAACAATCACGTATTCAAGCAGAAATTCAAGAAGGCT
TAATGCGTACGCGTTTGGTACCATTCACTCGTTTACTGCCACGCTTACAACGTATTGTACGTCAAACATCTTCCACCCTA
AATCGTCCTGCAGAATTGATTGTGAACAATACTGAAGGTGAATTAGACCGTACCATTCTAGAACGTTTAGTTACACCGCT
TGAACATATGCTACGGAATGCGGTTGACCATGGTATTGAAGATCCTGAACAACGTCAGTTAGCCCATAAACCTGAAGTTG
GTAGAATTGAACTCAACATTAGCCGTCAAGGTACGGATGTTATGGTTGAATTCCATGATGATGGTAAAGGGATTGATGTT
GCGAAAATTAAAGAGAAAGCTATTTCTTTAGGTTTGATGAAAGCCGATCAGCAGCTTGAAAAGCAGGAAATACTTCAATT
TATTTTCCACCCTGGTTTTAGTACCGCACAGCAGATTACGCAAATCTCTGGTCGTGGTGTAGGTTTGGACGTGGTACAGA
GTGCTATTAAAGCGCTTGGTGGTCATGTCGCTGTAGACTCTACCTTTGGCAAAGGCACCAGCTTTAGTATTCGCGTACCA
ACGACGGTCGCGGTGAGCGATGCCTTGATGGTGAAATCTGGGGATCAGCAATTTGCAGTTCCGTTGGCGCAGATTGAGCG
TATTGTGCGTATTGCTCCGAACGCATTGGAAAGTTATTTCAACAGCAAAGAAGACTACTTTAAGATTGATAATGAAAGTT
ACAAACTCCGTTATTTGTCAGAGTTTGTCTCGAATCAGCCTTTACCTCGTTTAGGTAGTATTGCGCATTCATTGCCTGTG
TTATTAATTAAAGGCAATAGTGGTCAAACCATTGCCTTGTTGGTCGATCAGTTGATTGGTTCGCGTGCGCAAATTGTGGT
GAAACCAATTGGTCAACAGTTCTCGGCTATTGGGGCAATTGCTGGCGCAACGATTCTCGGTGATGGTCAAGTATGTCTGA
TTTTGGATGGGCAAAATATTGCGCGTCAGATTCAAACCACACAACGAGTGAAGCATGCCAATGATCAACGCGATTCATAC
CGTTATAGTGCTACACGTCGTTTAATCATGATTGTGGATGACTCGGTGACTGTACGTAAGGTGACTTCGCGTCTGTTAGA
GCGTCAGGGTTATGATGTAGTGACTGCGAAAGATGGTGTTGATGCCATGGAGCAGTTGGAAAATGTTAAACCAGACTTAA
TGCTGTTGGATATTGAAATGCCGCGTATGGATGGTTTTGAAGTGACTAACTTGATTCGTCACCATGAGATCCACAAGCAG
TTGCCAATTATCATGATTACATCACGTACAGGTGAAAAACACCGTGAACGTGCATTTAGTTTGGGTGTAACTCACTATAT
GGGTAAACCATTCCAAGAGGCAGACTTGTTGAATAACATTGAAAGCCTATTGACAGTGAAACAGGGGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

62.062

100

0.631


Multiple sequence alignment