Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   ACJQW4_RS03475 Genome accession   NZ_CP178606
Coordinates   739884..742106 (+) Length   740 a.a.
NCBI ID   WP_241628382.1    Uniprot ID   -
Organism   Acinetobacter sp. A7.4     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 734884..747106
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJQW4_RS03450 (ACJQW4_03450) - 734972..735811 (+) 840 WP_241628386.1 HlyC/CorC family transporter -
  ACJQW4_RS03455 (ACJQW4_03455) lnt 735808..737367 (+) 1560 WP_241628385.1 apolipoprotein N-acyltransferase -
  ACJQW4_RS03460 (ACJQW4_03460) - 737439..737783 (-) 345 WP_241628384.1 hypothetical protein -
  ACJQW4_RS03465 (ACJQW4_03465) gspG 738058..738495 (-) 438 WP_281070041.1 type II secretion system major pseudopilin GspG -
  ACJQW4_RS03470 (ACJQW4_03470) gspF 738526..739731 (-) 1206 WP_241628383.1 type II secretion system inner membrane protein GspF -
  ACJQW4_RS03475 (ACJQW4_03475) priA 739884..742106 (+) 2223 WP_241628382.1 primosomal protein N' Machinery gene
  ACJQW4_RS03480 (ACJQW4_03480) - 742161..744002 (+) 1842 WP_241628380.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  ACJQW4_RS03485 (ACJQW4_03485) - 744053..744928 (+) 876 WP_241628378.1 Hsp33 family molecular chaperone HslO -
  ACJQW4_RS03490 (ACJQW4_03490) - 745227..745691 (+) 465 WP_241628375.1 DUF2147 domain-containing protein -
  ACJQW4_RS03495 (ACJQW4_03495) - 745840..746796 (+) 957 WP_241628373.1 DnaJ C-terminal domain-containing protein -

Sequence

Protein


Download         Length: 740 a.a.        Molecular weight: 84181.14 Da        Isoelectric Point: 8.5480

>NTDB_id=1090387 ACJQW4_RS03475 WP_241628382.1 739884..742106(+) (priA) [Acinetobacter sp. A7.4]
MPNTVSPTLPLYRIRVAVPAHVYDCFDYQISADDYERAQIGARVAVPFGPRNLVGVIMEKLPLDAPSNPKFKLKSIQALL
DDEAILDDKVLTLLTWVAQYYQFPIGEVVQSALPSLLRQGKPYDLLAHMWRLLDQHAEDKIKRSEKQQHAYKILKLHPTG
TSENILNLAGIETATLRALEKKGICEAYLEQKDFSPQTLSLAQMPLTANPDQKHAIQQVLKSLSSYHAYLLDGLTGSGKT
EVYLQIMHEVLKQGKQVLVLVPEIGLTPQTISRFQSRFHCHIALLHSGLTDAKRLQAWQSAQTGKASIILGTRSAIYTPL
HNLGLIILDEEHDLSFKQQEGFRYHARDVALYRAHLENCPIILGSATPSMESYALVNQGKLTCLELNERAGTALLPKLHI
LDLKLGRKQHGFSQFLLDEMHKRLARKDQVLIFLNRRGYAPVLICESCAWQAKCPHCDANFTLHTQPYQHLHCHHCGTIH
RVPDHCPQCQHTELKPIGMGTAKVEESLKELFPEFDVIRVDRDSTSRVGSWQKIYDRIQKSEPVILLGTQMLAKGHHFPY
VSLVAILDIDSGLLSVDFRAPERTAQLIVQVAGRAGRGEKKGDVYLQTLRPEHPLLHTLVDGDYRQFARQTLKERQQALF
PPYRYAALIRCESKSQELNQQYLTEHAQQLRQISELNIDIWGPIPAPMERKAGRYQAHMVLLSKDRARLHYYLRAWWQNM
LQHKPASMKLSLDIDPQEFS

Nucleotide


Download         Length: 2223 bp        

>NTDB_id=1090387 ACJQW4_RS03475 WP_241628382.1 739884..742106(+) (priA) [Acinetobacter sp. A7.4]
ATGCCAAATACTGTATCACCCACTCTACCTCTTTATCGGATTCGTGTTGCCGTTCCAGCGCATGTCTATGACTGTTTCGA
CTATCAAATTTCCGCAGACGATTATGAGCGGGCACAGATTGGCGCACGCGTTGCAGTTCCCTTTGGACCACGCAATTTGG
TTGGGGTCATTATGGAAAAACTTCCACTCGACGCACCCAGCAACCCCAAATTCAAGTTAAAGTCCATTCAAGCCCTGTTA
GATGACGAAGCCATTTTAGATGACAAAGTTTTAACTTTGTTGACATGGGTGGCTCAATATTACCAATTCCCGATTGGTGA
AGTCGTGCAGAGCGCATTGCCTAGTCTATTACGTCAAGGCAAACCCTATGATTTACTGGCACATATGTGGCGCCTGCTTG
ACCAACATGCAGAAGACAAAATTAAGCGTTCTGAGAAACAGCAACATGCTTATAAAATTTTAAAGCTGCACCCTACCGGA
ACCTCTGAAAATATTTTGAATTTGGCAGGGATTGAAACCGCGACCTTAAGGGCTTTAGAAAAGAAAGGTATCTGTGAAGC
CTATTTAGAGCAGAAGGATTTTAGTCCACAAACCTTAAGTTTGGCGCAAATGCCGCTGACTGCTAATCCAGATCAAAAGC
ATGCCATTCAGCAAGTCTTAAAGTCTCTCTCTTCTTATCATGCCTATTTACTGGATGGTTTAACGGGTAGTGGTAAGACC
GAAGTGTATTTGCAAATCATGCATGAGGTACTGAAGCAAGGTAAACAGGTACTGGTACTGGTGCCTGAAATTGGACTGAC
TCCTCAAACCATCAGTCGTTTTCAATCCCGCTTTCACTGTCATATTGCGTTGCTGCATTCGGGACTGACCGATGCCAAAC
GTCTGCAAGCTTGGCAAAGTGCACAAACGGGCAAAGCCTCGATTATTTTAGGCACCCGATCCGCCATTTACACCCCACTG
CATAATTTAGGTTTAATCATTCTTGATGAAGAACATGATCTGTCTTTTAAACAGCAAGAAGGCTTTCGCTACCATGCGCG
TGATGTGGCTCTGTATCGCGCACATCTAGAAAACTGTCCGATTATTCTGGGTTCCGCCACCCCAAGTATGGAAAGCTATG
CACTGGTCAATCAAGGCAAATTAACCTGTCTGGAATTGAATGAACGTGCAGGCACCGCGCTACTGCCTAAGTTGCACATT
TTGGATTTAAAGCTCGGACGTAAGCAGCATGGATTTAGCCAGTTTTTACTGGATGAAATGCATAAGCGTCTAGCCCGTAA
AGATCAGGTCCTAATTTTTCTTAATCGACGTGGCTATGCGCCCGTGCTGATTTGTGAAAGTTGTGCTTGGCAAGCCAAAT
GCCCACATTGCGATGCCAATTTTACCTTGCACACGCAGCCTTATCAGCACCTGCATTGCCATCATTGCGGCACCATTCAT
CGTGTTCCCGATCACTGTCCACAATGCCAACATACTGAACTGAAACCGATTGGTATGGGCACAGCAAAAGTCGAAGAAAG
TTTAAAAGAACTTTTTCCTGAGTTCGATGTGATTCGGGTCGATCGAGACTCGACTAGCCGTGTCGGCAGTTGGCAAAAAA
TTTATGATCGGATTCAGAAAAGTGAACCTGTAATTTTGCTCGGCACGCAAATGCTCGCCAAAGGACATCACTTCCCTTAT
GTGTCATTGGTCGCCATTTTAGATATTGATTCAGGCTTACTCAGCGTCGATTTTCGTGCACCAGAACGTACTGCGCAACT
GATTGTACAGGTGGCAGGTCGTGCAGGGCGTGGTGAGAAGAAAGGCGATGTCTATTTACAAACCCTACGTCCAGAACATC
CCTTGTTGCATACGCTAGTCGATGGCGATTATCGACAGTTTGCACGCCAGACCTTAAAAGAACGACAACAGGCTTTATTT
CCACCTTATCGTTATGCAGCACTGATTCGCTGTGAATCGAAAAGTCAGGAACTGAATCAGCAGTATCTCACTGAACATGC
ACAACAACTGCGCCAAATTTCGGAACTGAATATCGATATCTGGGGACCGATTCCAGCCCCCATGGAACGTAAAGCAGGTC
GTTATCAGGCACATATGGTGCTATTGTCTAAAGATCGAGCACGTTTACACTATTACTTAAGAGCATGGTGGCAAAATATG
TTGCAACACAAACCAGCCAGCATGAAACTGAGTCTGGACATTGATCCACAAGAATTTAGCTAA

Domains

Predicted by InterproScan.

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)

Primosomal protein N C-terminal domain (PriA_C)

(642-736)

Type III restriction enzyme, res subunit (ResIII)

(209-369)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

70.659

100

0.709

Multiple sequence alignment