Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   ABFT42_RS07790 Genome accession   NZ_CP178596
Coordinates   1522778..1523350 (+) Length   190 a.a.
NCBI ID   WP_413287221.1    Uniprot ID   -
Organism   Bacillus mojavensis strain C3     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1517778..1528350
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABFT42_RS07760 (ABFT42_07760) dapD 1517953..1518663 (+) 711 WP_010334062.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  ABFT42_RS07765 (ABFT42_07765) - 1518734..1519858 (+) 1125 WP_268505548.1 N-acetyldiaminopimelate deacetylase -
  ABFT42_RS07770 (ABFT42_07770) - 1519919..1520164 (+) 246 WP_010334064.1 YkuS family protein -
  ABFT42_RS07775 (ABFT42_07775) - 1520199..1521002 (-) 804 WP_010334065.1 mechanosensitive ion channel family protein -
  ABFT42_RS07780 (ABFT42_07780) ahpA 1521247..1521789 (+) 543 WP_268446327.1 biofilm-specific peroxidase AhpA -
  ABFT42_RS07785 (ABFT42_07785) ykuV 1521870..1522328 (+) 459 WP_010334067.1 thiol-disulfide oxidoreductase YkuV -
  ABFT42_RS07790 (ABFT42_07790) rok 1522778..1523350 (+) 573 WP_413287221.1 transcriptional regulator Rok Regulator
  ABFT42_RS07795 (ABFT42_07795) - 1523393..1524358 (-) 966 WP_326226974.1 sporulation protein -
  ABFT42_RS07800 (ABFT42_07800) - 1524491..1525090 (+) 600 WP_413287222.1 molybdenum cofactor guanylyltransferase -
  ABFT42_RS07805 (ABFT42_07805) - 1525142..1526161 (+) 1020 WP_095714704.1 MoeB/ThiF family adenylyltransferase -
  ABFT42_RS07810 (ABFT42_07810) glp 1526179..1527471 (+) 1293 WP_010334072.1 gephyrin-like molybdotransferase Glp -
  ABFT42_RS07815 (ABFT42_07815) mobB 1527432..1527953 (+) 522 WP_095714705.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 190 a.a.        Molecular weight: 21742.73 Da        Isoelectric Point: 9.8783

>NTDB_id=1090305 ABFT42_RS07790 WP_413287221.1 1522778..1523350(+) (rok) [Bacillus mojavensis strain C3]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSETKKEFRSERKTDSLPVLAELAAQEIRSYQPPS
QQQSAQPQLQTISSLPAGIPDGATRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESVESTE

Nucleotide


Download         Length: 573 bp        

>NTDB_id=1090305 ABFT42_RS07790 WP_413287221.1 1522778..1523350(+) (rok) [Bacillus mojavensis strain C3]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTACGATTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGCGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAACGAAAAAGGAGTTCC
GTTCTGAAAGAAAAACTGACTCTCTGCCAGTTCTCGCCGAGCTTGCAGCTCAGGAAATCAGAAGCTATCAGCCGCCATCA
CAGCAGCAGTCCGCCCAGCCTCAGCTTCAAACTATTTCCTCTCTTCCTGCCGGTATACCAGATGGAGCGACAAGAAGAAG
AAGAGGAACGGCAAGACCGGGGTCAAAAGCAGCTAAACTGCGTGAAGCGGCTATTAAAACATTAAAACGCCACAACGCGG
CAATTAAAAGTTCCGAACTTCAAAAAGAGATTGAAAAGGAAAGCGGTCTGGAAATTCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTATCCTGAAGTGAAAAAACCGTATCGCGGCCAGTACATTTTAGAGGGCGAAATTGAATCCGTTGA
ATCAACAGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

94.709

99.474

0.942

Multiple sequence alignment