Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   ABFT42_RS06290 Genome accession   NZ_CP178596
Coordinates   1259514..1260665 (+) Length   383 a.a.
NCBI ID   WP_326226880.1    Uniprot ID   -
Organism   Bacillus mojavensis strain C3     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1254514..1265665
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABFT42_RS06260 (ABFT42_06260) - 1255185..1256402 (+) 1218 WP_326197372.1 MFS transporter -
  ABFT42_RS06265 (ABFT42_06265) - 1256569..1257147 (+) 579 WP_010333747.1 GNAT family N-acetyltransferase -
  ABFT42_RS06270 (ABFT42_06270) spx 1257326..1257721 (+) 396 WP_010333748.1 transcriptional regulator Spx -
  ABFT42_RS06275 (ABFT42_06275) - 1257764..1258420 (-) 657 WP_168747421.1 TerC family protein -
  ABFT42_RS06280 (ABFT42_06280) - 1258608..1258718 (+) 111 WP_128568472.1 hypothetical protein -
  ABFT42_RS06285 (ABFT42_06285) mecA 1258700..1259356 (+) 657 WP_010333750.1 adaptor protein MecA Regulator
  ABFT42_RS06290 (ABFT42_06290) coiA 1259514..1260665 (+) 1152 WP_326226880.1 competence protein CoiA family protein Machinery gene
  ABFT42_RS06295 (ABFT42_06295) pepF 1260895..1262724 (+) 1830 WP_010333752.1 oligoendopeptidase F -
  ABFT42_RS06300 (ABFT42_06300) - 1262762..1262929 (-) 168 WP_010333753.1 hypothetical protein -
  ABFT42_RS06305 (ABFT42_06305) spxH 1263243..1264142 (-) 900 WP_413287146.1 protease adaptor protein SpxH -
  ABFT42_RS06310 (ABFT42_06310) - 1264139..1264537 (-) 399 WP_010333756.1 thiol management oxidoreductase -
  ABFT42_RS06315 (ABFT42_06315) - 1264804..1265535 (-) 732 WP_413287147.1 lytic transglycosylase domain-containing protein -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44660.68 Da        Isoelectric Point: 10.0121

>NTDB_id=1090300 ABFT42_RS06290 WP_326226880.1 1259514..1260665(+) (coiA) [Bacillus mojavensis strain C3]
MFSAVTEDGQVFHLIGRQSREKLKQTRFFCPVCAEELDVKLGSQKAPHFAHKQNKSCTIDIEPESAYHLEGKRQLYVWLK
TQKASPLLEPYVREIKQRPDILAKVKGNTLAVEYQCATLPPDVFQKRTAGFKQAGMIPRWILGGNRLKRTSSSFYQLSAF
HWQFINTSQNSNLLCYCPKTHSFLRLSHIIPFYTTHFYCSVQTIPVRQAAAEDLFFTESDSSFKHTDWTGAILRFRRKTH
RFLSKDINRLRLLFYEKRQTPLSFLPTEVFVPVQKGAVFKSPVFVWQGYLYLFITDLGYKHAPIRFSAILQHCKLHIHKK
NILLRGEYSDQGLSEAVKQYIEFLCKKGFLRETQKEVYVLNQPAKRSQSLQDLIEKDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=1090300 ABFT42_RS06290 WP_326226880.1 1259514..1260665(+) (coiA) [Bacillus mojavensis strain C3]
TTGTTTAGTGCTGTGACAGAAGACGGTCAAGTTTTCCACCTCATAGGCAGGCAGAGCAGAGAAAAATTAAAGCAGACCAG
GTTTTTTTGCCCGGTGTGTGCAGAGGAGCTCGATGTGAAGCTAGGGTCTCAGAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCACGATAGACATAGAACCTGAGAGCGCCTATCACTTAGAAGGAAAACGGCAGCTATATGTATGGCTGAAA
ACGCAAAAGGCTTCACCGCTCTTAGAGCCGTATGTCCGAGAGATTAAACAAAGGCCCGACATCTTGGCGAAAGTTAAGGG
GAATACGCTTGCTGTTGAATACCAATGCGCGACTCTCCCTCCTGATGTCTTTCAAAAAAGAACAGCCGGTTTCAAACAAG
CAGGAATGATACCGCGGTGGATTCTTGGGGGCAACCGCTTAAAACGGACATCTTCATCCTTTTACCAGCTGTCCGCTTTC
CATTGGCAGTTTATCAATACCAGTCAGAACAGCAATCTGTTATGTTACTGCCCCAAAACACATTCTTTCCTGAGGCTCAG
CCACATCATCCCGTTTTACACAACCCATTTTTACTGCTCCGTCCAAACGATTCCAGTCCGTCAGGCAGCGGCAGAAGATC
TCTTTTTCACTGAATCGGATTCATCGTTTAAGCACACAGATTGGACAGGAGCCATTCTCCGTTTTCGCCGCAAAACTCAT
CGGTTTCTCTCTAAAGATATAAATCGGCTTAGGCTTTTGTTTTATGAAAAACGGCAAACGCCTCTCTCTTTTCTTCCGAC
AGAGGTGTTTGTTCCTGTACAGAAAGGAGCCGTTTTCAAGAGTCCCGTTTTTGTATGGCAGGGTTATCTTTATCTGTTTA
TTACGGATCTGGGGTATAAACATGCGCCCATTCGCTTTTCAGCCATTTTGCAGCACTGCAAACTACACATTCATAAAAAG
AACATTCTGCTCAGAGGAGAATACAGCGATCAGGGTCTCAGTGAGGCTGTTAAACAGTACATTGAATTTTTGTGCAAGAA
GGGATTTTTAAGAGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCCGCAAAGCGCAGCCAATCATTACAGGATCTCA
TTGAAAAAGACAGAAGCTGTTTTATCGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

75.871

97.389

0.739


Multiple sequence alignment