Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   ABFT42_RS06175 Genome accession   NZ_CP178596
Coordinates   1237225..1237416 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus mojavensis strain C3     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1232225..1242416
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABFT42_RS06145 (ABFT42_06145) argF 1233054..1234026 (+) 973 Protein_1145 ornithine carbamoyltransferase -
  ABFT42_RS06150 (ABFT42_06150) - 1234112..1234291 (+) 180 WP_229147832.1 YjzC family protein -
  ABFT42_RS06155 (ABFT42_06155) - 1234337..1234522 (-) 186 WP_010333727.1 YjzD family protein -
  ABFT42_RS06160 (ABFT42_06160) - 1234781..1235518 (+) 738 WP_413287142.1 hypothetical protein -
  ABFT42_RS06165 (ABFT42_06165) - 1235602..1236165 (+) 564 WP_229147835.1 hypothetical protein -
  ABFT42_RS06170 (ABFT42_06170) med 1236257..1237210 (+) 954 WP_413287143.1 BMP family ABC transporter substrate-binding protein Regulator
  ABFT42_RS06175 (ABFT42_06175) comZ 1237225..1237416 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  ABFT42_RS06180 (ABFT42_06180) - 1237446..1237676 (-) 231 WP_081638273.1 hypothetical protein -
  ABFT42_RS06185 (ABFT42_06185) fabH 1237842..1238780 (+) 939 WP_010333732.1 beta-ketoacyl-ACP synthase III -
  ABFT42_RS06190 (ABFT42_06190) fabF 1238803..1240041 (+) 1239 WP_106022352.1 beta-ketoacyl-ACP synthase II -
  ABFT42_RS06195 (ABFT42_06195) - 1240121..1240906 (+) 786 WP_413287144.1 DUF2268 domain-containing protein -
  ABFT42_RS06200 (ABFT42_06200) appD 1241097..1242083 (+) 987 WP_268504856.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=1090296 ABFT42_RS06175 WP_003224559.1 1237225..1237416(+) (comZ) [Bacillus mojavensis strain C3]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=1090296 ABFT42_RS06175 WP_003224559.1 1237225..1237416(+) (comZ) [Bacillus mojavensis strain C3]
ATGCAGCACGAAAAATCACTTGAGTTTTTGCAAATTGCAATGAAATATCTGCCTGAAGCGAAAGAGCAGCTAGAAAAATC
GGGAATAGAACTGTCGATGGAGGCCATTCAGCCGTTTATGAATTTATTTACAACGGTAATGGCGGAAGCCTACGAGCTAG
GTAAATCCGACGCGAAATCTGAAACCGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment