Detailed information NTG1090293

Bioinformatically predicted

Overview

• Name: addB
• Type: Machinery gene
• Locus tag: ABFT42_RS05820
• Genome accession: NZ_CP178596
• Coordinates: 1166485..1169985 (+)
• Length: 1166 a.a.
• NCBI ID: WP_413287122.1
• Uniprot ID: -
• Organism: Bacillus mojavensis strain C3
• Function: homologous recombination; plasmid transformation (predicted from homology) Homologous recombination

Genomic Context

Location: 1161485..1174985

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABFT42_RS05800 (ABFT42_05800)	-	1162366..1163568 (-)	1203	WP_413287120.1	MDR family MFS transporter	-
ABFT42_RS05805 (ABFT42_05805)	-	1163684..1165414 (+)	1731	WP_413287121.1	ABC transporter substrate-binding protein	-
ABFT42_RS05810 (ABFT42_05810)	-	1165449..1165763 (-)	315	WP_229147768.1	four-helix bundle copper-binding protein	-
ABFT42_RS05815 (ABFT42_05815)	-	1165897..1166301 (-)	405	Protein_1079	ferritin-like domain-containing protein	-
ABFT42_RS05820 (ABFT42_05820)	addB	1166485..1169985 (+)	3501	WP_413287122.1	helicase-exonuclease AddAB subunit AddB	Machinery gene
ABFT42_RS05825 (ABFT42_05825)	addA	1169972..1173676 (+)	3705	WP_413287123.1	helicase-exonuclease AddAB subunit AddA	Machinery gene
ABFT42_RS05830 (ABFT42_05830)	sbcD	1173750..1174928 (+)	1179	WP_168747368.1	exonuclease subunit SbcD	-

Sequence

Protein

• Length: 1166 a.a.
• Molecular weight: 134727.80 Da
• Isoelectric Point: 5.5849

>NTDB_id=1090293 ABFT42_RS05820 WP_413287122.1 1166485..1169985(+) (addB) [Bacillus mojavensis strain C3]
MGAEFLVGRSGSGKTKLIIDSIQDELRRAPFGKPIIFLVPDQMTFLMEYELAKTPDTGGMIRAQVFSFSRLAWRVLQHTG
GMSRPFLTSTGVQMLLRKLIEEHKQEFKVYQKASDKSGFTAQVERMLTEFKRYCLEPEDIRRMADSGTASEYRGERVLSE
KLHDLSILYQQMEKSLEGQYLHSEDYLTLLAEHIPQAEDLKGAHVYVDGFYQFTPQEFRVLEQLMLQAEHITFSLTADKP
SHEREPQELDLFRMTGKTYYRLHQTAKELNLDITYKELDGLKRHKYVPELAHLEAQYEARPVIPFAEKQEAFTVMQATNR
RAELEGIAREIHSLVREKGYRYKDVAILARQPEDYKDMVKEVFADYEIPYFIDGKTSMLNHPLVEFIRSSLDVLKGNWRY
EAVFRCVKTELLFPLNQPKAKVREQVDQLENYCIAYGIKGDRWTKGDRFHYRRFVSLDDEFAQTDQEIEMENMLNDTRDW
IVPPLFQLQKRMKKAKTVQEKAEALYRYLEETDVPLKLDQERQRAEEDGRIIEAQQHQQAWDAVIQLLEEFVEMMGGDEI
SLDLFQQMMETGAESLTFSLIPPALDQVFVGNMDLSRIYGTSCTFVVGANDGVLPARPDENGVLSDDDREWLKTIGIELS
SGGRERLLDEHFLIYMALSSPSDRLYVTYPIADAEGKTLLPSIVIKRLEELFPKHRERLLTNEPEQVSDEEQLMYLVNKS
VAQSYTASQLRLWTREYEISDVWWSAYNALMNEPDRLESKKLFSSLFFRNEVKQLERSVSRQLYGERIQGSVSRMETFNA
CPFSHFASHGLHLKERQFFKLEAPDIGQLFHSSLKLISDRLREQKLDWRDLTKEQCELFSYDAVERLAPKLQKEILLSSN
RHYYVKEKLQKIVTRVSGILSEHAKASGFVPIGLELGFGGKGPLPPLTFKLKNGCTMELVGRIDRVDKAESSKGLLLRIV
DYKSSDKGLDLAEVYYGLALQMLTYLDLSITHSLDWLGMKATPAGVLYFHIHDPMIQSNLPLGLDEIEQEIFKKFKMKGL
LLGDQEAIRLMDTTLQEGRSNIINAGLKKDGSLRSDSAAVGEKEFELLTKHVRRTFQEAGEQITDGRVSIEPYKMKNKTP
CTYCAFKSVCQFDESLEENEYRQLKAEKDKTVLDWIKKEADGNEHS

Nucleotide

• Length: 3501 bp

>NTDB_id=1090293 ABFT42_RS05820 WP_413287122.1 1166485..1169985(+) (addB) [Bacillus mojavensis strain C3]
TTGGGAGCAGAGTTTTTAGTAGGCAGGTCCGGGAGTGGAAAAACGAAGCTGATCATCGACAGCATTCAAGATGAACTGCG
CCGGGCTCCATTCGGGAAACCGATCATTTTTCTAGTCCCGGATCAAATGACGTTTTTAATGGAATACGAGCTTGCTAAAA
CGCCTGATACGGGCGGCATGATTCGTGCTCAAGTCTTCAGCTTTTCACGACTGGCCTGGCGCGTCCTCCAGCATACGGGA
GGAATGAGCAGGCCGTTTCTTACGAGCACGGGCGTACAGATGCTCCTGCGGAAGCTCATTGAAGAGCATAAACAGGAGTT
TAAAGTCTATCAAAAAGCAAGTGACAAAAGCGGTTTTACCGCACAGGTGGAACGGATGCTGACTGAGTTTAAGAGATACT
GTCTGGAACCGGAAGATATTCGCCGGATGGCGGATAGCGGAACAGCTTCCGAGTATCGAGGGGAACGTGTTTTATCTGAA
AAGCTTCATGATTTATCGATCCTGTACCAGCAGATGGAAAAAAGCCTTGAAGGTCAGTATCTTCATTCTGAGGATTATTT
GACACTATTGGCAGAGCATATCCCGCAGGCGGAAGATTTGAAAGGGGCACATGTCTATGTAGACGGCTTTTATCAGTTTA
CACCGCAGGAATTCAGGGTGTTAGAGCAGCTTATGCTTCAGGCAGAGCATATCACGTTTTCACTCACAGCGGACAAGCCG
TCACATGAGAGGGAGCCGCAGGAACTTGATTTGTTCAGAATGACGGGAAAAACGTATTATCGCCTGCACCAGACGGCAAA
GGAACTGAATCTGGACATCACCTATAAAGAGCTTGATGGATTAAAGCGGCACAAGTACGTACCGGAATTAGCCCATTTGG
AAGCACAGTATGAAGCGCGTCCGGTTATTCCGTTTGCTGAGAAACAAGAGGCTTTTACCGTGATGCAGGCCACAAACAGA
CGGGCAGAGCTGGAAGGTATTGCCCGGGAAATCCATAGTCTTGTCAGAGAGAAGGGCTACCGTTACAAGGATGTGGCGAT
TTTAGCGCGTCAGCCGGAAGACTACAAGGATATGGTCAAGGAAGTATTTGCAGATTACGAGATTCCTTATTTTATTGACG
GGAAAACGTCTATGCTGAACCACCCGTTAGTGGAGTTTATCCGGTCAAGCCTTGACGTATTAAAGGGGAATTGGCGTTAT
GAAGCAGTGTTCCGCTGCGTGAAAACCGAACTGTTATTCCCGCTTAACCAGCCGAAGGCCAAGGTAAGAGAGCAGGTTGA
TCAGCTGGAGAATTACTGTATCGCTTACGGCATCAAAGGCGATCGCTGGACAAAGGGCGACCGTTTCCATTACAGACGTT
TTGTGTCGCTAGATGATGAATTTGCGCAGACCGATCAAGAAATTGAAATGGAAAACATGCTGAATGACACGCGCGATTGG
ATTGTTCCGCCGCTGTTCCAGCTGCAGAAACGAATGAAAAAAGCAAAAACGGTTCAAGAGAAGGCGGAGGCGCTTTACCG
TTATTTAGAAGAGACGGATGTGCCGCTGAAGCTGGATCAGGAAAGACAGCGGGCTGAGGAAGACGGCAGAATCATTGAAG
CACAGCAGCATCAGCAGGCATGGGACGCTGTCATTCAGCTGCTTGAGGAGTTTGTGGAAATGATGGGCGGAGATGAAATT
TCTCTTGATTTGTTTCAGCAGATGATGGAAACCGGTGCAGAGTCACTGACATTCTCTCTCATTCCTCCGGCGCTTGATCA
GGTGTTTGTCGGCAATATGGATTTGTCCAGAATATACGGTACCTCATGTACTTTTGTGGTTGGGGCAAACGACGGCGTCC
TGCCGGCTCGCCCTGATGAAAATGGCGTGCTGTCGGATGATGATCGTGAGTGGCTGAAGACGATAGGTATTGAGCTTTCC
TCCGGCGGGCGGGAGCGTCTGCTTGATGAGCATTTCCTGATCTATATGGCGCTTTCTAGCCCATCTGACCGCCTTTATGT
GACGTATCCGATTGCTGATGCGGAAGGAAAAACGCTTTTGCCGTCGATTGTCATCAAGCGGCTGGAAGAACTGTTTCCAA
AGCATCGCGAGCGTCTATTGACAAATGAACCGGAGCAGGTCAGCGATGAGGAACAGCTTATGTATCTTGTCAATAAAAGC
GTGGCGCAATCATACACCGCTAGCCAGCTCAGGTTATGGACGAGGGAATATGAGATCAGCGACGTCTGGTGGAGCGCGTA
CAATGCGCTGATGAATGAACCTGACAGGCTGGAGTCGAAAAAGCTTTTCTCAAGCCTGTTTTTCCGCAATGAAGTCAAGC
AGCTTGAACGTTCTGTATCGAGACAGCTCTATGGTGAACGTATTCAAGGGAGCGTGTCGAGGATGGAAACCTTTAACGCT
TGTCCGTTCTCCCATTTTGCGTCTCACGGGCTGCATCTGAAGGAACGTCAATTTTTCAAGCTTGAAGCACCGGATATCGG
GCAGCTCTTTCATTCCAGTTTAAAACTGATCTCAGACCGGCTGCGCGAGCAAAAATTAGATTGGCGCGACCTAACGAAGG
AGCAGTGCGAGCTGTTTTCTTATGACGCGGTCGAGCGGCTGGCGCCGAAGCTGCAAAAAGAAATTCTGCTCAGTTCAAAC
CGGCATTATTACGTGAAGGAAAAACTGCAGAAAATTGTGACACGCGTGTCCGGCATTTTAAGCGAGCATGCGAAAGCGAG
CGGATTCGTGCCGATCGGCCTTGAATTGGGCTTTGGCGGAAAGGGCCCGCTCCCGCCGCTTACCTTTAAGCTGAAAAACG
GCTGTACGATGGAGCTCGTCGGGCGGATTGACCGCGTGGATAAAGCGGAAAGCTCTAAAGGCCTGCTCCTCCGGATTGTC
GATTATAAATCCAGTGATAAAGGCCTTGACTTGGCGGAAGTGTATTACGGACTTGCGCTGCAAATGCTGACGTATCTGGA
TTTATCGATTACACATTCGTTAGACTGGCTAGGAATGAAAGCCACGCCGGCCGGGGTTCTGTACTTCCATATTCATGACC
CGATGATACAATCGAATCTTCCGCTTGGACTTGATGAGATTGAACAGGAAATTTTTAAGAAATTTAAGATGAAGGGCCTC
CTCCTCGGTGATCAGGAGGCAATTCGCCTCATGGATACAACCCTTCAAGAAGGAAGATCAAATATCATCAATGCGGGCTT
GAAGAAAGACGGCTCTCTCAGATCGGATTCAGCAGCAGTCGGTGAAAAAGAATTTGAGCTGTTGACGAAGCATGTGCGCC
GCACCTTCCAAGAAGCAGGCGAGCAAATCACTGACGGGCGCGTATCCATTGAGCCGTATAAAATGAAGAACAAGACACCT
TGCACATACTGTGCGTTTAAATCAGTATGCCAATTTGATGAATCATTAGAAGAAAACGAGTATCGTCAGTTAAAGGCCGA
AAAGGACAAGACGGTACTTGATTGGATAAAGAAGGAGGCTGATGGCAATGAACATTCCTAA

Domains

Predicted by InterproScan.

• UvrD-like helicase C-terminal domain (UvrD_C) (306-668)

• PD-(D/E)XK nuclease superfamily (PDDEXK_1) (790-1131)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
addB	Bacillus subtilis subsp. subtilis str. 168	94.768	100	0.948