Detailed information    

insolico Bioinformatically predicted

Overview


Name   recX   Type   Regulator
Locus tag   ABFT42_RS04590 Genome accession   NZ_CP178596
Coordinates   944841..945632 (+) Length   263 a.a.
NCBI ID   WP_168747241.1    Uniprot ID   -
Organism   Bacillus mojavensis strain C3     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context


Location: 939841..950632
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABFT42_RS04560 (ABFT42_04560) - 940687..941718 (+) 1032 WP_010333443.1 FecCD family ABC transporter permease -
  ABFT42_RS04565 (ABFT42_04565) - 941831..942709 (+) 879 WP_413287057.1 PhzF family phenazine biosynthesis isomerase -
  ABFT42_RS04570 (ABFT42_04570) - 942797..943381 (+) 585 WP_010333445.1 nitroreductase -
  ABFT42_RS04575 (ABFT42_04575) - 943420..943611 (-) 192 WP_229148989.1 YfhD family protein -
  ABFT42_RS04580 (ABFT42_04580) - 943677..943787 (-) 111 WP_010333447.1 YfhE family protein -
  ABFT42_RS04585 (ABFT42_04585) - 943841..944752 (-) 912 WP_326226380.1 TIGR01777 family oxidoreductase -
  ABFT42_RS04590 (ABFT42_04590) recX 944841..945632 (+) 792 WP_168747241.1 recombination regulator RecX Regulator
  ABFT42_RS04595 (ABFT42_04595) - 945640..945960 (+) 321 WP_326226381.1 YfhH family protein -
  ABFT42_RS04600 (ABFT42_04600) - 946098..947291 (+) 1194 WP_413287058.1 MFS transporter -
  ABFT42_RS04605 (ABFT42_04605) - 947325..947477 (-) 153 WP_010333452.1 small, acid-soluble spore protein K -
  ABFT42_RS04610 (ABFT42_04610) - 947602..947871 (+) 270 WP_024120650.1 YfhJ family protein -
  ABFT42_RS04615 (ABFT42_04615) - 947908..948291 (-) 384 WP_326226384.1 hypothetical protein -
  ABFT42_RS04620 (ABFT42_04620) - 948568..949086 (+) 519 WP_010333456.1 SH3 domain-containing protein -
  ABFT42_RS04625 (ABFT42_04625) - 949172..949504 (+) 333 WP_026014680.1 SdpI family protein -
  ABFT42_RS04630 (ABFT42_04630) - 949491..950354 (+) 864 WP_326226387.1 alpha/beta hydrolase -

Sequence


Protein


Download         Length: 263 a.a.        Molecular weight: 30841.08 Da        Isoelectric Point: 6.5271

>NTDB_id=1090287 ABFT42_RS04590 WP_168747241.1 944841..945632(+) (recX) [Bacillus mojavensis strain C3]
MPFITKISAQKKNTERFNIFLDEKYAFSVDADVLVKFELKKGKELDDLEIIEIQYGDEVKKGFNRAIEFLSYRMRSTKEV
EDYLKKKETSAPVIAEVIHRLNDYSYLNDQEFAAAYVSTHKKTNGKGPDVLFRELKAKGIDDDTIKDTLGSFSFEEQTEK
AVKHIEKLLKKDKKLSSKEIKQRAQMQLQRKGFSFDVISAALEQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQFLREEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=1090287 ABFT42_RS04590 WP_168747241.1 944841..945632(+) (recX) [Bacillus mojavensis strain C3]
ATGCCATTTATTACAAAGATATCAGCGCAAAAGAAAAATACTGAACGTTTTAATATTTTTCTGGATGAAAAATATGCTTT
CAGCGTTGACGCAGATGTGCTCGTGAAATTTGAGCTTAAAAAGGGAAAAGAGCTTGATGACCTCGAGATCATTGAGATTC
AATACGGCGATGAAGTGAAAAAAGGCTTCAACCGTGCGATTGAGTTTTTATCCTATCGAATGAGGTCAACGAAAGAGGTA
GAAGACTACTTAAAGAAAAAAGAAACCTCGGCGCCCGTCATTGCGGAAGTGATTCATAGGCTGAACGATTACAGCTATTT
AAATGACCAAGAGTTTGCGGCGGCCTATGTAAGCACTCACAAAAAAACAAACGGAAAAGGGCCTGACGTTTTGTTCAGAG
AGCTGAAGGCGAAAGGAATCGATGACGATACGATTAAAGATACGCTAGGTTCTTTCTCGTTTGAGGAACAGACGGAAAAA
GCAGTTAAGCATATCGAAAAGCTTCTGAAGAAAGACAAGAAACTCTCTTCAAAAGAAATCAAACAGCGAGCCCAGATGCA
GCTGCAGCGCAAAGGCTTTTCATTTGATGTCATCTCTGCGGCGCTGGAGCAGATTGAATACGAAAATGATGAAGACACTG
AAAAAGAAGCGCTGCGTCTTCATGCGGAAAAAGCGTTTAGAAAATACCGTTATGACGGCTCCTATGAAAGTGCCATGAAG
GTCAAACAATTTTTATTTAGAAAAGGATTCTCACTCGATTTAATCGAGCAATTTCTGCGGGAAGAGGAGTAG

Domains


Predicted by InterproScan.

(84-206)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

91.255

100

0.913


Multiple sequence alignment