Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | ABFT42_RS00245 | Genome accession | NZ_CP178596 |
| Coordinates | 44533..44823 (-) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus mojavensis strain C3 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 39533..49823
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABFT42_RS00205 (ABFT42_00205) | darA | 39553..39882 (+) | 330 | WP_003218295.1 | cyclic di-AMP receptor DarA | - |
| ABFT42_RS00210 (ABFT42_00210) | - | 39895..40335 (+) | 441 | WP_010332684.1 | YaaR family protein | - |
| ABFT42_RS00215 (ABFT42_00215) | holB | 40347..41336 (+) | 990 | WP_286059177.1 | DNA polymerase III subunit delta' | - |
| ABFT42_RS00220 (ABFT42_00220) | ricT | 41339..42166 (+) | 828 | WP_010332686.1 | competence/sporulation regulator complex protein RicT | - |
| ABFT42_RS00225 (ABFT42_00225) | yabA | 42181..42540 (+) | 360 | WP_010332687.1 | replication initiation-control protein YabA | - |
| ABFT42_RS00230 (ABFT42_00230) | - | 42601..43344 (+) | 744 | WP_286059176.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| ABFT42_RS00235 (ABFT42_00235) | - | 43331..43630 (+) | 300 | WP_010332689.1 | GIY-YIG nuclease family protein | - |
| ABFT42_RS00240 (ABFT42_00240) | rsmI | 43605..44483 (+) | 879 | WP_026014644.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| ABFT42_RS00245 (ABFT42_00245) | abrB | 44533..44823 (-) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| ABFT42_RS00250 (ABFT42_00250) | metG | 45320..47314 (+) | 1995 | WP_410034727.1 | methionine--tRNA ligase | - |
| ABFT42_RS00255 (ABFT42_00255) | - | 47393..48160 (+) | 768 | WP_326195758.1 | TatD family hydrolase | - |
| ABFT42_RS00260 (ABFT42_00260) | - | 48406..49629 (+) | 1224 | WP_413287361.1 | ubiquitin-like domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=1090277 ABFT42_RS00245 WP_003226760.1 44533..44823(-) (abrB) [Bacillus mojavensis strain C3]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=1090277 ABFT42_RS00245 WP_003226760.1 44533..44823(-) (abrB) [Bacillus mojavensis strain C3]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTGATTCCTATCGAATTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATTTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGACGATAACCTTAAACTTGCCGGCGGCAAATTGGTACTAAGCAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTGATTCCTATCGAATTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATTTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGACGATAACCTTAAACTTGCCGGCGGCAAATTGGTACTAAGCAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |